Gene : Thhalv10005358m.g E. salsugineum v1.0
Defline:  (1 of 55) PTHR23273 - REPLICATION FACTOR A 1, RFA1 Genomic Order:  1606
Name:  ? Thhalv10005358m.g Secondary Identifier:  ? PAC:20198316
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10005358m.g 0.5kb upstream 0.5kb upstream 2656 true scaffold_6: 6504033-6506688 Eutrema salsugineum
Thhalv10005358m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6504033-6504532 Eutrema salsugineum
Thhalv10005358m.g 0.5kb downstream 0.5kb downstream 2656 true scaffold_6: 6504533-6507188 Eutrema salsugineum
Thhalv10005358m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6506689-6507188 Eutrema salsugineum
Thhalv10005358m.g 1.0kb upstream 1.0kb upstream 3156 true scaffold_6: 6503533-6506688 Eutrema salsugineum
Thhalv10005358m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6503533-6504532 Eutrema salsugineum
Thhalv10005358m.g 1.0kb downstream 1.0kb downstream 3156 true scaffold_6: 6504533-6507688 Eutrema salsugineum
Thhalv10005358m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6506689-6507688 Eutrema salsugineum
Thhalv10005358m.g 2.0kb upstream 2.0kb upstream 4156 true scaffold_6: 6502533-6506688 Eutrema salsugineum
Thhalv10005358m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6502533-6504532 Eutrema salsugineum
Thhalv10005358m.g 2.0kb downstream 2.0kb downstream 4156 true scaffold_6: 6504533-6508688 Eutrema salsugineum
Thhalv10005358m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6506689-6508688 Eutrema salsugineum
Thhalv10005358m.g 5.0kb upstream 5.0kb upstream 7156 true scaffold_6: 6499533-6506688 Eutrema salsugineum
Thhalv10005358m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6499533-6504532 Eutrema salsugineum
Thhalv10005358m.g 5.0kb downstream 5.0kb downstream 7156 true scaffold_6: 6504533-6511688 Eutrema salsugineum
Thhalv10005358m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6506689-6511688 Eutrema salsugineum
Thhalv10005358m.g 10.0kb upstream 10.0kb upstream 12156 true scaffold_6: 6494533-6506688 Eutrema salsugineum
Thhalv10005358m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6494533-6504532 Eutrema salsugineum
Thhalv10005358m.g 10.0kb downstream 10.0kb downstream 12156 true scaffold_6: 6504533-6516688 Eutrema salsugineum
Thhalv10005358m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6506689-6516688 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122358891 5261 Brassicaceae Singleton cluster - no MSA
123796806 5264 Brassicales-Malvales Singleton cluster - no MSA
124294543 5266 SBM Singleton cluster - no MSA
124147070 5268 Malvidae Singleton cluster - no MSA
123873295 5270 Rosid Singleton cluster - no MSA
123457382 5271 Pentapetalae Singleton cluster - no MSA
122492799 5272 Eudicot Singleton cluster - no MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain