Gene : Thhalv10004864m.g E. salsugineum v1.0
Defline:  (1 of 13) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr Genomic Order:  1212
Name:  ? Thhalv10004864m.g Secondary Identifier:  ? PAC:20199809
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004864m.g 0.5kb upstream 0.5kb upstream 2930 true scaffold_6: 4899925-4902854 Eutrema salsugineum
Thhalv10004864m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4899925-4900424 Eutrema salsugineum
Thhalv10004864m.g 0.5kb downstream 0.5kb downstream 2930 true scaffold_6: 4900425-4903354 Eutrema salsugineum
Thhalv10004864m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4902855-4903354 Eutrema salsugineum
Thhalv10004864m.g 1.0kb upstream 1.0kb upstream 3430 true scaffold_6: 4899425-4902854 Eutrema salsugineum
Thhalv10004864m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4899425-4900424 Eutrema salsugineum
Thhalv10004864m.g 1.0kb downstream 1.0kb downstream 3430 true scaffold_6: 4900425-4903854 Eutrema salsugineum
Thhalv10004864m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4902855-4903854 Eutrema salsugineum
Thhalv10004864m.g 2.0kb upstream 2.0kb upstream 4430 true scaffold_6: 4898425-4902854 Eutrema salsugineum
Thhalv10004864m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4898425-4900424 Eutrema salsugineum
Thhalv10004864m.g 2.0kb downstream 2.0kb downstream 4430 true scaffold_6: 4900425-4904854 Eutrema salsugineum
Thhalv10004864m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4902855-4904854 Eutrema salsugineum
Thhalv10004864m.g 5.0kb upstream 5.0kb upstream 7430 true scaffold_6: 4895425-4902854 Eutrema salsugineum
Thhalv10004864m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4895425-4900424 Eutrema salsugineum
Thhalv10004864m.g 5.0kb downstream 5.0kb downstream 7430 true scaffold_6: 4900425-4907854 Eutrema salsugineum
Thhalv10004864m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4902855-4907854 Eutrema salsugineum
Thhalv10004864m.g 10.0kb upstream 10.0kb upstream 12430 true scaffold_6: 4890425-4902854 Eutrema salsugineum
Thhalv10004864m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4890425-4900424 Eutrema salsugineum
Thhalv10004864m.g 10.0kb downstream 10.0kb downstream 12430 true scaffold_6: 4900425-4912854 Eutrema salsugineum
Thhalv10004864m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4902855-4912854 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366953 5261 Brassicaceae View MSA
123799269 5264 Brassicales-Malvales View MSA
124351148 5266 SBM View MSA
124250408 5268 Malvidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain