Gene : Thhalv10011262m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR13301:SF60 - CELLULOSE SYNTHASE-LIKE PROTEIN E1 Genomic Order:  45
Name:  ? Thhalv10011262m.g Secondary Identifier:  ? PAC:20184011
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-1001 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10011262m.g 0.5kb upstream 0.5kb upstream 3165 true scaffold_7: 217676-220840 Eutrema salsugineum
Thhalv10011262m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 220341-220840 Eutrema salsugineum
Thhalv10011262m.g 0.5kb downstream 0.5kb downstream 3165 true scaffold_7: 217176-220340 Eutrema salsugineum
Thhalv10011262m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 217176-217675 Eutrema salsugineum
Thhalv10011262m.g 1.0kb upstream 1.0kb upstream 3665 true scaffold_7: 217676-221340 Eutrema salsugineum
Thhalv10011262m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 220341-221340 Eutrema salsugineum
Thhalv10011262m.g 1.0kb downstream 1.0kb downstream 3665 true scaffold_7: 216676-220340 Eutrema salsugineum
Thhalv10011262m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 216676-217675 Eutrema salsugineum
Thhalv10011262m.g 2.0kb upstream 2.0kb upstream 4665 true scaffold_7: 217676-222340 Eutrema salsugineum
Thhalv10011262m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 220341-222340 Eutrema salsugineum
Thhalv10011262m.g 2.0kb downstream 2.0kb downstream 4665 true scaffold_7: 215676-220340 Eutrema salsugineum
Thhalv10011262m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 215676-217675 Eutrema salsugineum
Thhalv10011262m.g 5.0kb upstream 5.0kb upstream 7665 true scaffold_7: 217676-225340 Eutrema salsugineum
Thhalv10011262m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 220341-225340 Eutrema salsugineum
Thhalv10011262m.g 5.0kb downstream 5.0kb downstream 7665 true scaffold_7: 212676-220340 Eutrema salsugineum
Thhalv10011262m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 212676-217675 Eutrema salsugineum
Thhalv10011262m.g 10.0kb upstream 10.0kb upstream 12665 true scaffold_7: 217676-230340 Eutrema salsugineum
Thhalv10011262m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 220341-230340 Eutrema salsugineum
Thhalv10011262m.g 10.0kb downstream 10.0kb downstream 12665 true scaffold_7: 207676-220340 Eutrema salsugineum
Thhalv10011262m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 207676-217675 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371179 5261 Brassicaceae View MSA
123830596 5264 Brassicales-Malvales View MSA
124339465 5266 SBM View MSA
124237130 5268 Malvidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain