Gene : Thhalv10005669m.g E. salsugineum v1.0

Defline:  (1 of 4) PF00443//PF04780//PF04781 - Ubiquitin carboxyl-terminal hydrolase (UCH) // Protein of unknown function (DUF629) (DUF629) // Protein of unknown function (DUF627) (DUF627) Genomic Order:  592
Name:  ? Thhalv10005669m.g Secondary Identifier:  ? PAC:20198155

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10005669m.g 0.5kb upstream 0.5kb upstream 4878 true scaffold_6: 2309747-2314624 Eutrema salsugineum
Thhalv10005669m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2309747-2310246 Eutrema salsugineum
Thhalv10005669m.g 0.5kb downstream 0.5kb downstream 4878 true scaffold_6: 2310247-2315124 Eutrema salsugineum
Thhalv10005669m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2314625-2315124 Eutrema salsugineum
Thhalv10005669m.g 1.0kb upstream 1.0kb upstream 5378 true scaffold_6: 2309247-2314624 Eutrema salsugineum
Thhalv10005669m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2309247-2310246 Eutrema salsugineum
Thhalv10005669m.g 1.0kb downstream 1.0kb downstream 5378 true scaffold_6: 2310247-2315624 Eutrema salsugineum
Thhalv10005669m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2314625-2315624 Eutrema salsugineum
Thhalv10005669m.g 2.0kb upstream 2.0kb upstream 6378 true scaffold_6: 2308247-2314624 Eutrema salsugineum
Thhalv10005669m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2308247-2310246 Eutrema salsugineum
Thhalv10005669m.g 2.0kb downstream 2.0kb downstream 6378 true scaffold_6: 2310247-2316624 Eutrema salsugineum
Thhalv10005669m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2314625-2316624 Eutrema salsugineum
Thhalv10005669m.g 5.0kb upstream 5.0kb upstream 9378 true scaffold_6: 2305247-2314624 Eutrema salsugineum
Thhalv10005669m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2305247-2310246 Eutrema salsugineum
Thhalv10005669m.g 5.0kb downstream 5.0kb downstream 9378 true scaffold_6: 2310247-2319624 Eutrema salsugineum
Thhalv10005669m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2314625-2319624 Eutrema salsugineum
Thhalv10005669m.g 10.0kb upstream 10.0kb upstream 14378 true scaffold_6: 2300247-2314624 Eutrema salsugineum
Thhalv10005669m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2300247-2310246 Eutrema salsugineum
Thhalv10005669m.g 10.0kb downstream 10.0kb downstream 14378 true scaffold_6: 2310247-2324624 Eutrema salsugineum
Thhalv10005669m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2314625-2324624 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380506 5261 Brassicaceae View MSA
123802750 5264 Brassicales-Malvales View MSA
124299918 5266 SBM View MSA
124252136 5268 Malvidae View MSA
124072872 5270 Rosid View MSA
123749894 5271 Pentapetalae View MSA
122797305 5272 Eudicot View MSA
122047573 5273 Angiosperm View MSA
121346745 5274 Embryophyte View MSA
123380438 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain