Gene : Thhalv10012188m.g E. salsugineum v1.0
Defline:  (1 of 93) KOG0417 - Ubiquitin-protein ligase Genomic Order:  900
Name:  ? Thhalv10012188m.g Secondary Identifier:  ? PAC:20185163
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7511 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10012188m.g 0.5kb upstream 0.5kb upstream 1276 true scaffold_7: 7277536-7278811 Eutrema salsugineum
Thhalv10012188m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7277536-7278035 Eutrema salsugineum
Thhalv10012188m.g 0.5kb downstream 0.5kb downstream 1276 true scaffold_7: 7278036-7279311 Eutrema salsugineum
Thhalv10012188m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7278812-7279311 Eutrema salsugineum
Thhalv10012188m.g 1.0kb upstream 1.0kb upstream 1776 true scaffold_7: 7277036-7278811 Eutrema salsugineum
Thhalv10012188m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7277036-7278035 Eutrema salsugineum
Thhalv10012188m.g 1.0kb downstream 1.0kb downstream 1776 true scaffold_7: 7278036-7279811 Eutrema salsugineum
Thhalv10012188m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7278812-7279811 Eutrema salsugineum
Thhalv10012188m.g 2.0kb upstream 2.0kb upstream 2776 true scaffold_7: 7276036-7278811 Eutrema salsugineum
Thhalv10012188m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7276036-7278035 Eutrema salsugineum
Thhalv10012188m.g 2.0kb downstream 2.0kb downstream 2776 true scaffold_7: 7278036-7280811 Eutrema salsugineum
Thhalv10012188m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7278812-7280811 Eutrema salsugineum
Thhalv10012188m.g 5.0kb upstream 5.0kb upstream 5776 true scaffold_7: 7273036-7278811 Eutrema salsugineum
Thhalv10012188m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7273036-7278035 Eutrema salsugineum
Thhalv10012188m.g 5.0kb downstream 5.0kb downstream 5776 true scaffold_7: 7278036-7283811 Eutrema salsugineum
Thhalv10012188m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7278812-7283811 Eutrema salsugineum
Thhalv10012188m.g 10.0kb upstream 10.0kb upstream 10776 true scaffold_7: 7268036-7278811 Eutrema salsugineum
Thhalv10012188m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7268036-7278035 Eutrema salsugineum
Thhalv10012188m.g 10.0kb downstream 10.0kb downstream 10776 true scaffold_7: 7278036-7288811 Eutrema salsugineum
Thhalv10012188m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7278812-7288811 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030981 5273 Angiosperm View MSA
122382259 5261 Brassicaceae View MSA
123842039 5264 Brassicales-Malvales View MSA
124323203 5266 SBM View MSA
124255587 5268 Malvidae View MSA
124041272 5270 Rosid View MSA
123647489 5271 Pentapetalae View MSA
122798530 5272 Eudicot View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain