Gene : Thhalv10012211m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR23023:SF135 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA10-RELATED Genomic Order:  704
Name:  ? Thhalv10012211m.g Secondary Identifier:  ? PAC:20184802
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWYDQC-4 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10012211m.g 0.5kb upstream 0.5kb upstream 2578 true scaffold_7: 4295666-4298243 Eutrema salsugineum
Thhalv10012211m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4297744-4298243 Eutrema salsugineum
Thhalv10012211m.g 0.5kb downstream 0.5kb downstream 2578 true scaffold_7: 4295166-4297743 Eutrema salsugineum
Thhalv10012211m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4295166-4295665 Eutrema salsugineum
Thhalv10012211m.g 1.0kb upstream 1.0kb upstream 3078 true scaffold_7: 4295666-4298743 Eutrema salsugineum
Thhalv10012211m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4297744-4298743 Eutrema salsugineum
Thhalv10012211m.g 1.0kb downstream 1.0kb downstream 3078 true scaffold_7: 4294666-4297743 Eutrema salsugineum
Thhalv10012211m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4294666-4295665 Eutrema salsugineum
Thhalv10012211m.g 2.0kb upstream 2.0kb upstream 4078 true scaffold_7: 4295666-4299743 Eutrema salsugineum
Thhalv10012211m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4297744-4299743 Eutrema salsugineum
Thhalv10012211m.g 2.0kb downstream 2.0kb downstream 4078 true scaffold_7: 4293666-4297743 Eutrema salsugineum
Thhalv10012211m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4293666-4295665 Eutrema salsugineum
Thhalv10012211m.g 5.0kb upstream 5.0kb upstream 7078 true scaffold_7: 4295666-4302743 Eutrema salsugineum
Thhalv10012211m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4297744-4302743 Eutrema salsugineum
Thhalv10012211m.g 5.0kb downstream 5.0kb downstream 7078 true scaffold_7: 4290666-4297743 Eutrema salsugineum
Thhalv10012211m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4290666-4295665 Eutrema salsugineum
Thhalv10012211m.g 10.0kb upstream 10.0kb upstream 12078 true scaffold_7: 4295666-4307743 Eutrema salsugineum
Thhalv10012211m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4297744-4307743 Eutrema salsugineum
Thhalv10012211m.g 10.0kb downstream 10.0kb downstream 12078 true scaffold_7: 4285666-4297743 Eutrema salsugineum
Thhalv10012211m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4285666-4295665 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364658 5261 Brassicaceae View MSA
123829988 5264 Brassicales-Malvales View MSA
124349496 5266 SBM View MSA
124250017 5268 Malvidae View MSA
124069751 5270 Rosid View MSA
123749752 5271 Pentapetalae View MSA
122794899 5272 Eudicot View MSA
122047342 5273 Angiosperm View MSA
121310731 5274 Embryophyte View MSA
123348144 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain