Gene : Thhalv10012325m.g E. salsugineum v1.0
Defline:  (1 of 3) 1.1.1.42 - Isocitrate dehydrogenase (NADP(+)) / oxalosuccinate carboxylase Genomic Order:  8
Name:  ? Thhalv10012325m.g Secondary Identifier:  ? PAC:20184360
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6549 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10012325m.g 0.5kb upstream 0.5kb upstream 3804 true scaffold_7: 36234-40037 Eutrema salsugineum
Thhalv10012325m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 39538-40037 Eutrema salsugineum
Thhalv10012325m.g 0.5kb downstream 0.5kb downstream 3804 true scaffold_7: 35734-39537 Eutrema salsugineum
Thhalv10012325m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 35734-36233 Eutrema salsugineum
Thhalv10012325m.g 1.0kb upstream 1.0kb upstream 4304 true scaffold_7: 36234-40537 Eutrema salsugineum
Thhalv10012325m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 39538-40537 Eutrema salsugineum
Thhalv10012325m.g 1.0kb downstream 1.0kb downstream 4304 true scaffold_7: 35234-39537 Eutrema salsugineum
Thhalv10012325m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 35234-36233 Eutrema salsugineum
Thhalv10012325m.g 2.0kb upstream 2.0kb upstream 5304 true scaffold_7: 36234-41537 Eutrema salsugineum
Thhalv10012325m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 39538-41537 Eutrema salsugineum
Thhalv10012325m.g 2.0kb downstream 2.0kb downstream 5304 true scaffold_7: 34234-39537 Eutrema salsugineum
Thhalv10012325m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 34234-36233 Eutrema salsugineum
Thhalv10012325m.g 5.0kb upstream 5.0kb upstream 8304 true scaffold_7: 36234-44537 Eutrema salsugineum
Thhalv10012325m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 39538-44537 Eutrema salsugineum
Thhalv10012325m.g 5.0kb downstream 5.0kb downstream 8304 true scaffold_7: 31234-39537 Eutrema salsugineum
Thhalv10012325m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 31234-36233 Eutrema salsugineum
Thhalv10012325m.g 10.0kb upstream 10.0kb upstream 13304 true scaffold_7: 36234-49537 Eutrema salsugineum
Thhalv10012325m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 39538-49537 Eutrema salsugineum
Thhalv10012325m.g 10.0kb downstream 10.0kb downstream 13304 true scaffold_7: 26234-39537 Eutrema salsugineum
Thhalv10012325m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 26234-36233 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361976 5261 Brassicaceae View MSA
123836810 5264 Brassicales-Malvales View MSA
124343936 5266 SBM View MSA
124253615 5268 Malvidae View MSA
124070230 5270 Rosid View MSA
123744673 5271 Pentapetalae View MSA
122792686 5272 Eudicot View MSA
122045414 5273 Angiosperm View MSA
121351363 5274 Embryophyte View MSA
123426624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain