Gene : Thhalv10011835m.g E. salsugineum v1.0
Defline:  (1 of 2) PF01241 - Photosystem I psaG / psaK (PSI_PSAK) Genomic Order:  61
Name:  ? Thhalv10011835m.g Secondary Identifier:  ? PAC:20184209
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PHOTOALL-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-101 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10011835m.g 0.5kb upstream 0.5kb upstream 1375 true scaffold_7: 287733-289107 Eutrema salsugineum
Thhalv10011835m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 287733-288232 Eutrema salsugineum
Thhalv10011835m.g 0.5kb downstream 0.5kb downstream 1375 true scaffold_7: 288233-289607 Eutrema salsugineum
Thhalv10011835m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 289108-289607 Eutrema salsugineum
Thhalv10011835m.g 1.0kb upstream 1.0kb upstream 1875 true scaffold_7: 287233-289107 Eutrema salsugineum
Thhalv10011835m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 287233-288232 Eutrema salsugineum
Thhalv10011835m.g 1.0kb downstream 1.0kb downstream 1875 true scaffold_7: 288233-290107 Eutrema salsugineum
Thhalv10011835m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 289108-290107 Eutrema salsugineum
Thhalv10011835m.g 2.0kb upstream 2.0kb upstream 2875 true scaffold_7: 286233-289107 Eutrema salsugineum
Thhalv10011835m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 286233-288232 Eutrema salsugineum
Thhalv10011835m.g 2.0kb downstream 2.0kb downstream 2875 true scaffold_7: 288233-291107 Eutrema salsugineum
Thhalv10011835m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 289108-291107 Eutrema salsugineum
Thhalv10011835m.g 5.0kb upstream 5.0kb upstream 5875 true scaffold_7: 283233-289107 Eutrema salsugineum
Thhalv10011835m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 283233-288232 Eutrema salsugineum
Thhalv10011835m.g 5.0kb downstream 5.0kb downstream 5875 true scaffold_7: 288233-294107 Eutrema salsugineum
Thhalv10011835m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 289108-294107 Eutrema salsugineum
Thhalv10011835m.g 10.0kb upstream 10.0kb upstream 10875 true scaffold_7: 278233-289107 Eutrema salsugineum
Thhalv10011835m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 278233-288232 Eutrema salsugineum
Thhalv10011835m.g 10.0kb downstream 10.0kb downstream 10875 true scaffold_7: 288233-299107 Eutrema salsugineum
Thhalv10011835m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 289108-299107 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363876 5261 Brassicaceae View MSA
123841347 5264 Brassicales-Malvales View MSA
124341917 5266 SBM View MSA
124237433 5268 Malvidae View MSA
124067062 5270 Rosid View MSA
123737989 5271 Pentapetalae View MSA
122787886 5272 Eudicot View MSA
122046392 5273 Angiosperm View MSA
121348949 5274 Embryophyte View MSA
123425419 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain