Gene : Thhalv10023406m.g E. salsugineum v1.0
Defline:  (1 of 4) 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase Genomic Order:  654
Name:  ? Thhalv10023406m.g Secondary Identifier:  ? PAC:20201142
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-2541 Eutrema salsugineum pathologic  
Esalsugineum PWY-5670 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10023406m.g 0.5kb upstream 0.5kb upstream 3432 true scaffold_8: 6124821-6128252 Eutrema salsugineum
Thhalv10023406m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6124821-6125320 Eutrema salsugineum
Thhalv10023406m.g 0.5kb downstream 0.5kb downstream 3432 true scaffold_8: 6125321-6128752 Eutrema salsugineum
Thhalv10023406m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6128253-6128752 Eutrema salsugineum
Thhalv10023406m.g 1.0kb upstream 1.0kb upstream 3932 true scaffold_8: 6124321-6128252 Eutrema salsugineum
Thhalv10023406m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6124321-6125320 Eutrema salsugineum
Thhalv10023406m.g 1.0kb downstream 1.0kb downstream 3932 true scaffold_8: 6125321-6129252 Eutrema salsugineum
Thhalv10023406m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6128253-6129252 Eutrema salsugineum
Thhalv10023406m.g 2.0kb upstream 2.0kb upstream 4932 true scaffold_8: 6123321-6128252 Eutrema salsugineum
Thhalv10023406m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6123321-6125320 Eutrema salsugineum
Thhalv10023406m.g 2.0kb downstream 2.0kb downstream 4932 true scaffold_8: 6125321-6130252 Eutrema salsugineum
Thhalv10023406m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6128253-6130252 Eutrema salsugineum
Thhalv10023406m.g 5.0kb upstream 5.0kb upstream 7932 true scaffold_8: 6120321-6128252 Eutrema salsugineum
Thhalv10023406m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6120321-6125320 Eutrema salsugineum
Thhalv10023406m.g 5.0kb downstream 5.0kb downstream 7932 true scaffold_8: 6125321-6133252 Eutrema salsugineum
Thhalv10023406m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6128253-6133252 Eutrema salsugineum
Thhalv10023406m.g 10.0kb upstream 10.0kb upstream 12932 true scaffold_8: 6115321-6128252 Eutrema salsugineum
Thhalv10023406m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6115321-6125320 Eutrema salsugineum
Thhalv10023406m.g 10.0kb downstream 10.0kb downstream 12932 true scaffold_8: 6125321-6138252 Eutrema salsugineum
Thhalv10023406m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6128253-6138252 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371858 5261 Brassicaceae View MSA
123838211 5264 Brassicales-Malvales View MSA
124342457 5266 SBM View MSA
124254451 5268 Malvidae View MSA
124072398 5270 Rosid View MSA
123747368 5271 Pentapetalae View MSA
122788930 5272 Eudicot View MSA
122042003 5273 Angiosperm View MSA
121344187 5274 Embryophyte View MSA
123428498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain