Gene : Thhalv10023331m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR31953:SF17 - ACID BETA-FRUCTOFURANOSIDASE 3, VACUOLAR-RELATED Genomic Order:  224
Name:  ? Thhalv10023331m.g Secondary Identifier:  ? PAC:20201059
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-621 Eutrema salsugineum pathologic  
Esalsugineum PWY66-373 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10023331m.g 0.5kb upstream 0.5kb upstream 4749 true scaffold_8: 1504321-1509069 Eutrema salsugineum
Thhalv10023331m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1508570-1509069 Eutrema salsugineum
Thhalv10023331m.g 0.5kb downstream 0.5kb downstream 4749 true scaffold_8: 1503821-1508569 Eutrema salsugineum
Thhalv10023331m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1503821-1504320 Eutrema salsugineum
Thhalv10023331m.g 1.0kb upstream 1.0kb upstream 5249 true scaffold_8: 1504321-1509569 Eutrema salsugineum
Thhalv10023331m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1508570-1509569 Eutrema salsugineum
Thhalv10023331m.g 1.0kb downstream 1.0kb downstream 5249 true scaffold_8: 1503321-1508569 Eutrema salsugineum
Thhalv10023331m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1503321-1504320 Eutrema salsugineum
Thhalv10023331m.g 2.0kb upstream 2.0kb upstream 6249 true scaffold_8: 1504321-1510569 Eutrema salsugineum
Thhalv10023331m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1508570-1510569 Eutrema salsugineum
Thhalv10023331m.g 2.0kb downstream 2.0kb downstream 6249 true scaffold_8: 1502321-1508569 Eutrema salsugineum
Thhalv10023331m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1502321-1504320 Eutrema salsugineum
Thhalv10023331m.g 5.0kb upstream 5.0kb upstream 9249 true scaffold_8: 1504321-1513569 Eutrema salsugineum
Thhalv10023331m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1508570-1513569 Eutrema salsugineum
Thhalv10023331m.g 5.0kb downstream 5.0kb downstream 9249 true scaffold_8: 1499321-1508569 Eutrema salsugineum
Thhalv10023331m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1499321-1504320 Eutrema salsugineum
Thhalv10023331m.g 10.0kb upstream 10.0kb upstream 14249 true scaffold_8: 1504321-1518569 Eutrema salsugineum
Thhalv10023331m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1508570-1518569 Eutrema salsugineum
Thhalv10023331m.g 10.0kb downstream 10.0kb downstream 14249 true scaffold_8: 1494321-1508569 Eutrema salsugineum
Thhalv10023331m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1494321-1504320 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375295 5261 Brassicaceae View MSA
123800923 5264 Brassicales-Malvales View MSA
124346860 5266 SBM View MSA
124237884 5268 Malvidae View MSA
124068075 5270 Rosid View MSA
123746739 5271 Pentapetalae View MSA
122793331 5272 Eudicot View MSA
122044228 5273 Angiosperm View MSA
121350675 5274 Embryophyte View MSA
123428659 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain