Gene : Thhalv10023359m.g E. salsugineum v1.0
Defline:  (1 of 1) PF00232//PF03004 - Glycosyl hydrolase family 1 (Glyco_hydro_1) // Plant transposase (Ptta/En/Spm family) (Transposase_24) Genomic Order:  568
Name:  ? Thhalv10023359m.g Secondary Identifier:  ? PAC:20201277
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5176 Eutrema salsugineum pathologic  
Esalsugineum PWY-7089 Eutrema salsugineum pathologic  
Esalsugineum PWY-7091 Eutrema salsugineum pathologic  
Esalsugineum PWY-7092 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10023359m.g 0.5kb upstream 0.5kb upstream 4165 true scaffold_8: 4796705-4800869 Eutrema salsugineum
Thhalv10023359m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 4796705-4797204 Eutrema salsugineum
Thhalv10023359m.g 0.5kb downstream 0.5kb downstream 4165 true scaffold_8: 4797205-4801369 Eutrema salsugineum
Thhalv10023359m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 4800870-4801369 Eutrema salsugineum
Thhalv10023359m.g 1.0kb upstream 1.0kb upstream 4665 true scaffold_8: 4796205-4800869 Eutrema salsugineum
Thhalv10023359m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 4796205-4797204 Eutrema salsugineum
Thhalv10023359m.g 1.0kb downstream 1.0kb downstream 4665 true scaffold_8: 4797205-4801869 Eutrema salsugineum
Thhalv10023359m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 4800870-4801869 Eutrema salsugineum
Thhalv10023359m.g 2.0kb upstream 2.0kb upstream 5665 true scaffold_8: 4795205-4800869 Eutrema salsugineum
Thhalv10023359m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 4795205-4797204 Eutrema salsugineum
Thhalv10023359m.g 2.0kb downstream 2.0kb downstream 5665 true scaffold_8: 4797205-4802869 Eutrema salsugineum
Thhalv10023359m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 4800870-4802869 Eutrema salsugineum
Thhalv10023359m.g 5.0kb upstream 5.0kb upstream 8665 true scaffold_8: 4792205-4800869 Eutrema salsugineum
Thhalv10023359m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 4792205-4797204 Eutrema salsugineum
Thhalv10023359m.g 5.0kb downstream 5.0kb downstream 8665 true scaffold_8: 4797205-4805869 Eutrema salsugineum
Thhalv10023359m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 4800870-4805869 Eutrema salsugineum
Thhalv10023359m.g 10.0kb upstream 10.0kb upstream 13665 true scaffold_8: 4787205-4800869 Eutrema salsugineum
Thhalv10023359m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 4787205-4797204 Eutrema salsugineum
Thhalv10023359m.g 10.0kb downstream 10.0kb downstream 13665 true scaffold_8: 4797205-4810869 Eutrema salsugineum
Thhalv10023359m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 4800870-4810869 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380441 5261 Brassicaceae View MSA
123802716 5264 Brassicales-Malvales View MSA
124350500 5266 SBM View MSA
124252389 5268 Malvidae View MSA
124071856 5270 Rosid View MSA
123753517 5271 Pentapetalae View MSA
122797747 5272 Eudicot View MSA
122051599 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain