Gene : Thhalv10024028m.g E. salsugineum v1.0
Defline:  (1 of 4) PTHR14237:SF28 - CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING PROTEIN Genomic Order:  493
Name:  ? Thhalv10024028m.g Secondary Identifier:  ? PAC:20201650
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5963 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10024028m.g 0.5kb upstream 0.5kb upstream 2094 true scaffold_8: 3868928-3871021 Eutrema salsugineum
Thhalv10024028m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3868928-3869427 Eutrema salsugineum
Thhalv10024028m.g 0.5kb downstream 0.5kb downstream 2094 true scaffold_8: 3869428-3871521 Eutrema salsugineum
Thhalv10024028m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3871022-3871521 Eutrema salsugineum
Thhalv10024028m.g 1.0kb upstream 1.0kb upstream 2594 true scaffold_8: 3868428-3871021 Eutrema salsugineum
Thhalv10024028m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3868428-3869427 Eutrema salsugineum
Thhalv10024028m.g 1.0kb downstream 1.0kb downstream 2594 true scaffold_8: 3869428-3872021 Eutrema salsugineum
Thhalv10024028m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3871022-3872021 Eutrema salsugineum
Thhalv10024028m.g 2.0kb upstream 2.0kb upstream 3594 true scaffold_8: 3867428-3871021 Eutrema salsugineum
Thhalv10024028m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3867428-3869427 Eutrema salsugineum
Thhalv10024028m.g 2.0kb downstream 2.0kb downstream 3594 true scaffold_8: 3869428-3873021 Eutrema salsugineum
Thhalv10024028m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3871022-3873021 Eutrema salsugineum
Thhalv10024028m.g 5.0kb upstream 5.0kb upstream 6594 true scaffold_8: 3864428-3871021 Eutrema salsugineum
Thhalv10024028m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3864428-3869427 Eutrema salsugineum
Thhalv10024028m.g 5.0kb downstream 5.0kb downstream 6594 true scaffold_8: 3869428-3876021 Eutrema salsugineum
Thhalv10024028m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3871022-3876021 Eutrema salsugineum
Thhalv10024028m.g 10.0kb upstream 10.0kb upstream 11594 true scaffold_8: 3859428-3871021 Eutrema salsugineum
Thhalv10024028m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3859428-3869427 Eutrema salsugineum
Thhalv10024028m.g 10.0kb downstream 10.0kb downstream 11594 true scaffold_8: 3869428-3881021 Eutrema salsugineum
Thhalv10024028m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3871022-3881021 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380810 5261 Brassicaceae View MSA
123838826 5264 Brassicales-Malvales View MSA
124348755 5266 SBM View MSA
124244591 5268 Malvidae View MSA
124069827 5270 Rosid View MSA
123745676 5271 Pentapetalae View MSA
122790060 5272 Eudicot View MSA
122044983 5273 Angiosperm View MSA
121350233 5274 Embryophyte View MSA
123381636 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain