Gene : Thhalv10023677m.g E. salsugineum v1.0
Defline:  (1 of 3) 5.1.3.1 - Ribulose-phosphate 3-epimerase / Xylulose phosphate 3-epimerase Genomic Order:  152
Name:  ? Thhalv10023677m.g Secondary Identifier:  ? PAC:20201465
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum CALVIN-PWY Eutrema salsugineum pathologic  
Esalsugineum NONOXIPENT-PWY Eutrema salsugineum pathologic  
Esalsugineum PENTOSE-P-PWY Eutrema salsugineum pathologic  
Esalsugineum PHOTOALL-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-5723 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10023677m.g 0.5kb upstream 0.5kb upstream 3148 true scaffold_8: 1058413-1061560 Eutrema salsugineum
Thhalv10023677m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1058413-1058912 Eutrema salsugineum
Thhalv10023677m.g 0.5kb downstream 0.5kb downstream 3148 true scaffold_8: 1058913-1062060 Eutrema salsugineum
Thhalv10023677m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1061561-1062060 Eutrema salsugineum
Thhalv10023677m.g 1.0kb upstream 1.0kb upstream 3648 true scaffold_8: 1057913-1061560 Eutrema salsugineum
Thhalv10023677m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1057913-1058912 Eutrema salsugineum
Thhalv10023677m.g 1.0kb downstream 1.0kb downstream 3648 true scaffold_8: 1058913-1062560 Eutrema salsugineum
Thhalv10023677m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1061561-1062560 Eutrema salsugineum
Thhalv10023677m.g 2.0kb upstream 2.0kb upstream 4648 true scaffold_8: 1056913-1061560 Eutrema salsugineum
Thhalv10023677m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1056913-1058912 Eutrema salsugineum
Thhalv10023677m.g 2.0kb downstream 2.0kb downstream 4648 true scaffold_8: 1058913-1063560 Eutrema salsugineum
Thhalv10023677m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1061561-1063560 Eutrema salsugineum
Thhalv10023677m.g 5.0kb upstream 5.0kb upstream 7648 true scaffold_8: 1053913-1061560 Eutrema salsugineum
Thhalv10023677m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1053913-1058912 Eutrema salsugineum
Thhalv10023677m.g 5.0kb downstream 5.0kb downstream 7648 true scaffold_8: 1058913-1066560 Eutrema salsugineum
Thhalv10023677m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1061561-1066560 Eutrema salsugineum
Thhalv10023677m.g 10.0kb upstream 10.0kb upstream 12648 true scaffold_8: 1048913-1061560 Eutrema salsugineum
Thhalv10023677m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1048913-1058912 Eutrema salsugineum
Thhalv10023677m.g 10.0kb downstream 10.0kb downstream 12648 true scaffold_8: 1058913-1071560 Eutrema salsugineum
Thhalv10023677m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1061561-1071560 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377398 5261 Brassicaceae View MSA
123840154 5264 Brassicales-Malvales View MSA
124344961 5266 SBM View MSA
124252799 5268 Malvidae View MSA
124064705 5270 Rosid View MSA
123748809 5271 Pentapetalae View MSA
122786225 5272 Eudicot View MSA
122042554 5273 Angiosperm View MSA
121347255 5274 Embryophyte View MSA
123428302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain