Gene : Thhalv10018293m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR21049:SF1 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1A Genomic Order:  436
Name:  ? Thhalv10018293m.g Secondary Identifier:  ? PAC:20191103
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10018293m.g 0.5kb upstream 0.5kb upstream 4617 true scaffold_9: 1869584-1874200 Eutrema salsugineum
Thhalv10018293m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1869584-1870083 Eutrema salsugineum
Thhalv10018293m.g 0.5kb downstream 0.5kb downstream 4617 true scaffold_9: 1870084-1874700 Eutrema salsugineum
Thhalv10018293m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1874201-1874700 Eutrema salsugineum
Thhalv10018293m.g 1.0kb upstream 1.0kb upstream 5117 true scaffold_9: 1869084-1874200 Eutrema salsugineum
Thhalv10018293m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1869084-1870083 Eutrema salsugineum
Thhalv10018293m.g 1.0kb downstream 1.0kb downstream 5117 true scaffold_9: 1870084-1875200 Eutrema salsugineum
Thhalv10018293m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1874201-1875200 Eutrema salsugineum
Thhalv10018293m.g 2.0kb upstream 2.0kb upstream 6117 true scaffold_9: 1868084-1874200 Eutrema salsugineum
Thhalv10018293m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1868084-1870083 Eutrema salsugineum
Thhalv10018293m.g 2.0kb downstream 2.0kb downstream 6117 true scaffold_9: 1870084-1876200 Eutrema salsugineum
Thhalv10018293m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1874201-1876200 Eutrema salsugineum
Thhalv10018293m.g 5.0kb upstream 5.0kb upstream 9117 true scaffold_9: 1865084-1874200 Eutrema salsugineum
Thhalv10018293m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1865084-1870083 Eutrema salsugineum
Thhalv10018293m.g 5.0kb downstream 5.0kb downstream 9117 true scaffold_9: 1870084-1879200 Eutrema salsugineum
Thhalv10018293m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1874201-1879200 Eutrema salsugineum
Thhalv10018293m.g 10.0kb upstream 10.0kb upstream 14117 true scaffold_9: 1860084-1874200 Eutrema salsugineum
Thhalv10018293m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1860084-1870083 Eutrema salsugineum
Thhalv10018293m.g 10.0kb downstream 10.0kb downstream 14117 true scaffold_9: 1870084-1884200 Eutrema salsugineum
Thhalv10018293m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1874201-1884200 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373711 5261 Brassicaceae View MSA
123827563 5264 Brassicales-Malvales View MSA
124338985 5266 SBM View MSA
124237474 5268 Malvidae View MSA
124068967 5270 Rosid View MSA
123737223 5271 Pentapetalae View MSA
122791942 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain