Gene : Thhalv10018277m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR31458:SF3 - POLYGALACTURONASE NON-CATALYTIC SUBUNIT JP630-RELATED Genomic Order:  1039
Name:  ? Thhalv10018277m.g Secondary Identifier:  ? PAC:20191684
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10018277m.g 0.5kb upstream 0.5kb upstream 2901 true scaffold_9: 4500087-4502987 Eutrema salsugineum
Thhalv10018277m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4500087-4500586 Eutrema salsugineum
Thhalv10018277m.g 0.5kb downstream 0.5kb downstream 2901 true scaffold_9: 4500587-4503487 Eutrema salsugineum
Thhalv10018277m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4502988-4503487 Eutrema salsugineum
Thhalv10018277m.g 1.0kb upstream 1.0kb upstream 3401 true scaffold_9: 4499587-4502987 Eutrema salsugineum
Thhalv10018277m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4499587-4500586 Eutrema salsugineum
Thhalv10018277m.g 1.0kb downstream 1.0kb downstream 3401 true scaffold_9: 4500587-4503987 Eutrema salsugineum
Thhalv10018277m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4502988-4503987 Eutrema salsugineum
Thhalv10018277m.g 2.0kb upstream 2.0kb upstream 4401 true scaffold_9: 4498587-4502987 Eutrema salsugineum
Thhalv10018277m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4498587-4500586 Eutrema salsugineum
Thhalv10018277m.g 2.0kb downstream 2.0kb downstream 4401 true scaffold_9: 4500587-4504987 Eutrema salsugineum
Thhalv10018277m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4502988-4504987 Eutrema salsugineum
Thhalv10018277m.g 5.0kb upstream 5.0kb upstream 7401 true scaffold_9: 4495587-4502987 Eutrema salsugineum
Thhalv10018277m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4495587-4500586 Eutrema salsugineum
Thhalv10018277m.g 5.0kb downstream 5.0kb downstream 7401 true scaffold_9: 4500587-4507987 Eutrema salsugineum
Thhalv10018277m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4502988-4507987 Eutrema salsugineum
Thhalv10018277m.g 10.0kb upstream 10.0kb upstream 12401 true scaffold_9: 4490587-4502987 Eutrema salsugineum
Thhalv10018277m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4490587-4500586 Eutrema salsugineum
Thhalv10018277m.g 10.0kb downstream 10.0kb downstream 12401 true scaffold_9: 4500587-4512987 Eutrema salsugineum
Thhalv10018277m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4502988-4512987 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361299 5261 Brassicaceae View MSA
123832587 5264 Brassicales-Malvales View MSA
124343319 5266 SBM View MSA
124238820 5268 Malvidae View MSA
124060515 5270 Rosid View MSA
123747690 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain