Gene : Thhalv10018077m.g E. salsugineum v1.0

Defline:  (1 of 1) PF12325 - TATA element modulatory factor 1 TATA binding (TMF_TATA_bd) Genomic Order:  17
Name:  ? Thhalv10018077m.g Secondary Identifier:  ? PAC:20191236

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10018077m.g 0.5kb upstream 0.5kb upstream 6906 true scaffold_9: 56878-63783 Eutrema salsugineum
Thhalv10018077m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 56878-57377 Eutrema salsugineum
Thhalv10018077m.g 0.5kb downstream 0.5kb downstream 6906 true scaffold_9: 57378-64283 Eutrema salsugineum
Thhalv10018077m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 63784-64283 Eutrema salsugineum
Thhalv10018077m.g 1.0kb upstream 1.0kb upstream 7406 true scaffold_9: 56378-63783 Eutrema salsugineum
Thhalv10018077m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 56378-57377 Eutrema salsugineum
Thhalv10018077m.g 1.0kb downstream 1.0kb downstream 7406 true scaffold_9: 57378-64783 Eutrema salsugineum
Thhalv10018077m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 63784-64783 Eutrema salsugineum
Thhalv10018077m.g 2.0kb upstream 2.0kb upstream 8406 true scaffold_9: 55378-63783 Eutrema salsugineum
Thhalv10018077m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 55378-57377 Eutrema salsugineum
Thhalv10018077m.g 2.0kb downstream 2.0kb downstream 8406 true scaffold_9: 57378-65783 Eutrema salsugineum
Thhalv10018077m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 63784-65783 Eutrema salsugineum
Thhalv10018077m.g 5.0kb upstream 5.0kb upstream 11406 true scaffold_9: 52378-63783 Eutrema salsugineum
Thhalv10018077m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 52378-57377 Eutrema salsugineum
Thhalv10018077m.g 5.0kb downstream 5.0kb downstream 11406 true scaffold_9: 57378-68783 Eutrema salsugineum
Thhalv10018077m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 63784-68783 Eutrema salsugineum
Thhalv10018077m.g 10.0kb upstream 10.0kb upstream 16406 true scaffold_9: 47378-63783 Eutrema salsugineum
Thhalv10018077m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 47378-57377 Eutrema salsugineum
Thhalv10018077m.g 10.0kb downstream 10.0kb downstream 16406 true scaffold_9: 57378-73783 Eutrema salsugineum
Thhalv10018077m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 63784-73783 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365712 5261 Brassicaceae View MSA
123835553 5264 Brassicales-Malvales View MSA
124345805 5266 SBM View MSA
124239837 5268 Malvidae View MSA
124066379 5270 Rosid View MSA
123748834 5271 Pentapetalae View MSA
122790742 5272 Eudicot View MSA
122045363 5273 Angiosperm View MSA
121349790 5274 Embryophyte View MSA
123428716 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain