Gene : Thhalv10018058m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR30523:SF6 - PHOSPHOENOLPYRUVATE CARBOXYLASE 4 Genomic Order:  1230
Name:  ? Thhalv10018058m.g Secondary Identifier:  ? PAC:20191936
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-241 Eutrema salsugineum pathologic  
Esalsugineum PWY-6549 Eutrema salsugineum pathologic  
Esalsugineum PWY-7115 Eutrema salsugineum pathologic  
Esalsugineum PWY-7117 Eutrema salsugineum pathologic  
Esalsugineum PWYQT-4429 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10018058m.g 0.5kb upstream 0.5kb upstream 6017 true scaffold_9: 5617882-5623898 Eutrema salsugineum
Thhalv10018058m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5617882-5618381 Eutrema salsugineum
Thhalv10018058m.g 0.5kb downstream 0.5kb downstream 6017 true scaffold_9: 5618382-5624398 Eutrema salsugineum
Thhalv10018058m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5623899-5624398 Eutrema salsugineum
Thhalv10018058m.g 1.0kb upstream 1.0kb upstream 6517 true scaffold_9: 5617382-5623898 Eutrema salsugineum
Thhalv10018058m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5617382-5618381 Eutrema salsugineum
Thhalv10018058m.g 1.0kb downstream 1.0kb downstream 6517 true scaffold_9: 5618382-5624898 Eutrema salsugineum
Thhalv10018058m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5623899-5624898 Eutrema salsugineum
Thhalv10018058m.g 2.0kb upstream 2.0kb upstream 7517 true scaffold_9: 5616382-5623898 Eutrema salsugineum
Thhalv10018058m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5616382-5618381 Eutrema salsugineum
Thhalv10018058m.g 2.0kb downstream 2.0kb downstream 7517 true scaffold_9: 5618382-5625898 Eutrema salsugineum
Thhalv10018058m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5623899-5625898 Eutrema salsugineum
Thhalv10018058m.g 5.0kb upstream 5.0kb upstream 10517 true scaffold_9: 5613382-5623898 Eutrema salsugineum
Thhalv10018058m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5613382-5618381 Eutrema salsugineum
Thhalv10018058m.g 5.0kb downstream 5.0kb downstream 10517 true scaffold_9: 5618382-5628898 Eutrema salsugineum
Thhalv10018058m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5623899-5628898 Eutrema salsugineum
Thhalv10018058m.g 10.0kb upstream 10.0kb upstream 15517 true scaffold_9: 5608382-5623898 Eutrema salsugineum
Thhalv10018058m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5608382-5618381 Eutrema salsugineum
Thhalv10018058m.g 10.0kb downstream 10.0kb downstream 15517 true scaffold_9: 5618382-5633898 Eutrema salsugineum
Thhalv10018058m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5623899-5633898 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370088 5261 Brassicaceae View MSA
123836867 5264 Brassicales-Malvales View MSA
124343843 5266 SBM View MSA
124239165 5268 Malvidae View MSA
124063566 5270 Rosid View MSA
123739033 5271 Pentapetalae View MSA
122792339 5272 Eudicot View MSA
122047821 5273 Angiosperm View MSA
123429064 5275 Viridiplantae View MSA
121344816 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain