Gene : Thhalv10018519m.g E. salsugineum v1.0
Defline:  (1 of 2) 2.6.1.11 - Acetylornithine transaminase / Succinylornithine aminotransferase Genomic Order:  93
Name:  ? Thhalv10018519m.g Secondary Identifier:  ? PAC:20192194
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ARGSYNBSUB-PWY Eutrema salsugineum pathologic  
Esalsugineum ARGSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum GLUTORN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10018519m.g 0.5kb upstream 0.5kb upstream 2425 true scaffold_9: 328242-330666 Eutrema salsugineum
Thhalv10018519m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 330167-330666 Eutrema salsugineum
Thhalv10018519m.g 0.5kb downstream 0.5kb downstream 2425 true scaffold_9: 327742-330166 Eutrema salsugineum
Thhalv10018519m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 327742-328241 Eutrema salsugineum
Thhalv10018519m.g 1.0kb upstream 1.0kb upstream 2925 true scaffold_9: 328242-331166 Eutrema salsugineum
Thhalv10018519m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 330167-331166 Eutrema salsugineum
Thhalv10018519m.g 1.0kb downstream 1.0kb downstream 2925 true scaffold_9: 327242-330166 Eutrema salsugineum
Thhalv10018519m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 327242-328241 Eutrema salsugineum
Thhalv10018519m.g 2.0kb upstream 2.0kb upstream 3925 true scaffold_9: 328242-332166 Eutrema salsugineum
Thhalv10018519m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 330167-332166 Eutrema salsugineum
Thhalv10018519m.g 2.0kb downstream 2.0kb downstream 3925 true scaffold_9: 326242-330166 Eutrema salsugineum
Thhalv10018519m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 326242-328241 Eutrema salsugineum
Thhalv10018519m.g 5.0kb upstream 5.0kb upstream 6925 true scaffold_9: 328242-335166 Eutrema salsugineum
Thhalv10018519m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 330167-335166 Eutrema salsugineum
Thhalv10018519m.g 5.0kb downstream 5.0kb downstream 6925 true scaffold_9: 323242-330166 Eutrema salsugineum
Thhalv10018519m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 323242-328241 Eutrema salsugineum
Thhalv10018519m.g 10.0kb upstream 10.0kb upstream 11925 true scaffold_9: 328242-340166 Eutrema salsugineum
Thhalv10018519m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 330167-340166 Eutrema salsugineum
Thhalv10018519m.g 10.0kb downstream 10.0kb downstream 11925 true scaffold_9: 318242-330166 Eutrema salsugineum
Thhalv10018519m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 318242-328241 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372513 5261 Brassicaceae View MSA
123839882 5264 Brassicales-Malvales View MSA
124344979 5266 SBM View MSA
124239289 5268 Malvidae View MSA
124071750 5270 Rosid View MSA
123736750 5271 Pentapetalae View MSA
122787472 5272 Eudicot View MSA
122044767 5273 Angiosperm View MSA
121344135 5274 Embryophyte View MSA
123424486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain