Gene : Thhalv10019100m.g E. salsugineum v1.0
Defline:  (1 of 2) KOG2424 - Protein involved in transcription start site selection Genomic Order:  704
Name:  ? Thhalv10019100m.g Secondary Identifier:  ? PAC:20191431
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10019100m.g 0.5kb upstream 0.5kb upstream 2557 true scaffold_9: 2988734-2991290 Eutrema salsugineum
Thhalv10019100m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2988734-2989233 Eutrema salsugineum
Thhalv10019100m.g 0.5kb downstream 0.5kb downstream 2557 true scaffold_9: 2989234-2991790 Eutrema salsugineum
Thhalv10019100m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2991291-2991790 Eutrema salsugineum
Thhalv10019100m.g 1.0kb upstream 1.0kb upstream 3057 true scaffold_9: 2988234-2991290 Eutrema salsugineum
Thhalv10019100m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2988234-2989233 Eutrema salsugineum
Thhalv10019100m.g 1.0kb downstream 1.0kb downstream 3057 true scaffold_9: 2989234-2992290 Eutrema salsugineum
Thhalv10019100m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2991291-2992290 Eutrema salsugineum
Thhalv10019100m.g 2.0kb upstream 2.0kb upstream 4057 true scaffold_9: 2987234-2991290 Eutrema salsugineum
Thhalv10019100m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2987234-2989233 Eutrema salsugineum
Thhalv10019100m.g 2.0kb downstream 2.0kb downstream 4057 true scaffold_9: 2989234-2993290 Eutrema salsugineum
Thhalv10019100m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2991291-2993290 Eutrema salsugineum
Thhalv10019100m.g 5.0kb upstream 5.0kb upstream 7057 true scaffold_9: 2984234-2991290 Eutrema salsugineum
Thhalv10019100m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2984234-2989233 Eutrema salsugineum
Thhalv10019100m.g 5.0kb downstream 5.0kb downstream 7057 true scaffold_9: 2989234-2996290 Eutrema salsugineum
Thhalv10019100m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2991291-2996290 Eutrema salsugineum
Thhalv10019100m.g 10.0kb upstream 10.0kb upstream 12057 true scaffold_9: 2979234-2991290 Eutrema salsugineum
Thhalv10019100m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2979234-2989233 Eutrema salsugineum
Thhalv10019100m.g 10.0kb downstream 10.0kb downstream 12057 true scaffold_9: 2989234-3001290 Eutrema salsugineum
Thhalv10019100m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2991291-3001290 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361790 5261 Brassicaceae View MSA
123831973 5264 Brassicales-Malvales View MSA
124336639 5266 SBM View MSA
124243441 5268 Malvidae View MSA
124062174 5270 Rosid View MSA
123740216 5271 Pentapetalae View MSA
122793137 5272 Eudicot View MSA
122048032 5273 Angiosperm View MSA
121343960 5274 Embryophyte View MSA
123424533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain