Gene : Thhalv10019202m.g E. salsugineum v1.0
Defline:  (1 of 4) 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase Genomic Order:  1570
Name:  ? Thhalv10019202m.g Secondary Identifier:  ? PAC:20191670
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum CALVIN-PWY Eutrema salsugineum pathologic  
Esalsugineum PHOTOALL-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-5723 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10019202m.g 0.5kb upstream 0.5kb upstream 1722 true scaffold_9: 9839267-9840988 Eutrema salsugineum
Thhalv10019202m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 9840489-9840988 Eutrema salsugineum
Thhalv10019202m.g 0.5kb downstream 0.5kb downstream 1722 true scaffold_9: 9838767-9840488 Eutrema salsugineum
Thhalv10019202m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 9838767-9839266 Eutrema salsugineum
Thhalv10019202m.g 1.0kb upstream 1.0kb upstream 2222 true scaffold_9: 9839267-9841488 Eutrema salsugineum
Thhalv10019202m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 9840489-9841488 Eutrema salsugineum
Thhalv10019202m.g 1.0kb downstream 1.0kb downstream 2222 true scaffold_9: 9838267-9840488 Eutrema salsugineum
Thhalv10019202m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 9838267-9839266 Eutrema salsugineum
Thhalv10019202m.g 2.0kb upstream 2.0kb upstream 3222 true scaffold_9: 9839267-9842488 Eutrema salsugineum
Thhalv10019202m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 9840489-9842488 Eutrema salsugineum
Thhalv10019202m.g 2.0kb downstream 2.0kb downstream 3222 true scaffold_9: 9837267-9840488 Eutrema salsugineum
Thhalv10019202m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 9837267-9839266 Eutrema salsugineum
Thhalv10019202m.g 5.0kb upstream 5.0kb upstream 6222 true scaffold_9: 9839267-9845488 Eutrema salsugineum
Thhalv10019202m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 9840489-9845488 Eutrema salsugineum
Thhalv10019202m.g 5.0kb downstream 5.0kb downstream 6222 true scaffold_9: 9834267-9840488 Eutrema salsugineum
Thhalv10019202m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 9834267-9839266 Eutrema salsugineum
Thhalv10019202m.g 10.0kb upstream 10.0kb upstream 11222 true scaffold_9: 9839267-9850488 Eutrema salsugineum
Thhalv10019202m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 9840489-9850488 Eutrema salsugineum
Thhalv10019202m.g 10.0kb downstream 10.0kb downstream 11222 true scaffold_9: 9829267-9840488 Eutrema salsugineum
Thhalv10019202m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 9829267-9839266 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380509 5261 Brassicaceae View MSA
123836682 5264 Brassicales-Malvales View MSA
124340616 5266 SBM View MSA
124250367 5268 Malvidae View MSA
124066802 5270 Rosid View MSA
123747186 5271 Pentapetalae View MSA
122796864 5272 Eudicot View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain