Gene : Thhalv10018956m.g E. salsugineum v1.0
Defline:  (1 of 2) 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase Genomic Order:  155
Name:  ? Thhalv10018956m.g Secondary Identifier:  ? PAC:20191518
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-1269 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10018956m.g 0.5kb upstream 0.5kb upstream 4209 true scaffold_9: 573982-578190 Eutrema salsugineum
Thhalv10018956m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 577691-578190 Eutrema salsugineum
Thhalv10018956m.g 0.5kb downstream 0.5kb downstream 4209 true scaffold_9: 573482-577690 Eutrema salsugineum
Thhalv10018956m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 573482-573981 Eutrema salsugineum
Thhalv10018956m.g 1.0kb upstream 1.0kb upstream 4709 true scaffold_9: 573982-578690 Eutrema salsugineum
Thhalv10018956m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 577691-578690 Eutrema salsugineum
Thhalv10018956m.g 1.0kb downstream 1.0kb downstream 4709 true scaffold_9: 572982-577690 Eutrema salsugineum
Thhalv10018956m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 572982-573981 Eutrema salsugineum
Thhalv10018956m.g 2.0kb upstream 2.0kb upstream 5709 true scaffold_9: 573982-579690 Eutrema salsugineum
Thhalv10018956m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 577691-579690 Eutrema salsugineum
Thhalv10018956m.g 2.0kb downstream 2.0kb downstream 5709 true scaffold_9: 571982-577690 Eutrema salsugineum
Thhalv10018956m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 571982-573981 Eutrema salsugineum
Thhalv10018956m.g 5.0kb upstream 5.0kb upstream 8709 true scaffold_9: 573982-582690 Eutrema salsugineum
Thhalv10018956m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 577691-582690 Eutrema salsugineum
Thhalv10018956m.g 5.0kb downstream 5.0kb downstream 8709 true scaffold_9: 568982-577690 Eutrema salsugineum
Thhalv10018956m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 568982-573981 Eutrema salsugineum
Thhalv10018956m.g 10.0kb upstream 10.0kb upstream 13709 true scaffold_9: 573982-587690 Eutrema salsugineum
Thhalv10018956m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 577691-587690 Eutrema salsugineum
Thhalv10018956m.g 10.0kb downstream 10.0kb downstream 13709 true scaffold_9: 563982-577690 Eutrema salsugineum
Thhalv10018956m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 563982-573981 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379396 5261 Brassicaceae View MSA
123829711 5264 Brassicales-Malvales View MSA
124345040 5266 SBM View MSA
124244021 5268 Malvidae View MSA
124065016 5270 Rosid View MSA
123738710 5271 Pentapetalae View MSA
122788202 5272 Eudicot View MSA
122050140 5273 Angiosperm View MSA
121346522 5274 Embryophyte View MSA
123424720 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain