Gene : Thhalv10019035m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR31852:SF1 - LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED Genomic Order:  1632
Name:  ? Thhalv10019035m.g Secondary Identifier:  ? PAC:20191133
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10019035m.g 0.5kb upstream 0.5kb upstream 2685 true scaffold_9: 11025643-11028327 Eutrema salsugineum
Thhalv10019035m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 11025643-11026142 Eutrema salsugineum
Thhalv10019035m.g 0.5kb downstream 0.5kb downstream 2685 true scaffold_9: 11026143-11028827 Eutrema salsugineum
Thhalv10019035m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 11028328-11028827 Eutrema salsugineum
Thhalv10019035m.g 1.0kb upstream 1.0kb upstream 3185 true scaffold_9: 11025143-11028327 Eutrema salsugineum
Thhalv10019035m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 11025143-11026142 Eutrema salsugineum
Thhalv10019035m.g 1.0kb downstream 1.0kb downstream 3185 true scaffold_9: 11026143-11029327 Eutrema salsugineum
Thhalv10019035m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 11028328-11029327 Eutrema salsugineum
Thhalv10019035m.g 2.0kb upstream 2.0kb upstream 4185 true scaffold_9: 11024143-11028327 Eutrema salsugineum
Thhalv10019035m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 11024143-11026142 Eutrema salsugineum
Thhalv10019035m.g 2.0kb downstream 2.0kb downstream 4185 true scaffold_9: 11026143-11030327 Eutrema salsugineum
Thhalv10019035m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 11028328-11030327 Eutrema salsugineum
Thhalv10019035m.g 5.0kb upstream 5.0kb upstream 7185 true scaffold_9: 11021143-11028327 Eutrema salsugineum
Thhalv10019035m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 11021143-11026142 Eutrema salsugineum
Thhalv10019035m.g 5.0kb downstream 5.0kb downstream 7185 true scaffold_9: 11026143-11033327 Eutrema salsugineum
Thhalv10019035m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 11028328-11033327 Eutrema salsugineum
Thhalv10019035m.g 10.0kb upstream 10.0kb upstream 12185 true scaffold_9: 11016143-11028327 Eutrema salsugineum
Thhalv10019035m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 11016143-11026142 Eutrema salsugineum
Thhalv10019035m.g 10.0kb downstream 10.0kb downstream 12185 true scaffold_9: 11026143-11038327 Eutrema salsugineum
Thhalv10019035m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 11028328-11038327 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368410 5261 Brassicaceae View MSA
123839937 5264 Brassicales-Malvales View MSA
124343640 5266 SBM View MSA
124243189 5268 Malvidae View MSA
124063776 5270 Rosid View MSA
123751487 5271 Pentapetalae View MSA
122787858 5272 Eudicot View MSA
122044505 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain