Gene : Thhalv10018971m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR12220 - 50S/60S RIBOSOMAL PROTEIN L16 Genomic Order:  1620
Name:  ? Thhalv10018971m.g Secondary Identifier:  ? PAC:20190933
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ALANINE-DEG3-PWY Eutrema salsugineum pathologic  
Esalsugineum ALANINE-SYN2-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-7115 Eutrema salsugineum pathologic  
Esalsugineum PWY-7117 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10018971m.g 0.5kb upstream 0.5kb upstream 1485 true scaffold_9: 10586090-10587574 Eutrema salsugineum
Thhalv10018971m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 10586090-10586589 Eutrema salsugineum
Thhalv10018971m.g 0.5kb downstream 0.5kb downstream 1485 true scaffold_9: 10586590-10588074 Eutrema salsugineum
Thhalv10018971m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 10587575-10588074 Eutrema salsugineum
Thhalv10018971m.g 1.0kb upstream 1.0kb upstream 1985 true scaffold_9: 10585590-10587574 Eutrema salsugineum
Thhalv10018971m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 10585590-10586589 Eutrema salsugineum
Thhalv10018971m.g 1.0kb downstream 1.0kb downstream 1985 true scaffold_9: 10586590-10588574 Eutrema salsugineum
Thhalv10018971m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 10587575-10588574 Eutrema salsugineum
Thhalv10018971m.g 2.0kb upstream 2.0kb upstream 2985 true scaffold_9: 10584590-10587574 Eutrema salsugineum
Thhalv10018971m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 10584590-10586589 Eutrema salsugineum
Thhalv10018971m.g 2.0kb downstream 2.0kb downstream 2985 true scaffold_9: 10586590-10589574 Eutrema salsugineum
Thhalv10018971m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 10587575-10589574 Eutrema salsugineum
Thhalv10018971m.g 5.0kb upstream 5.0kb upstream 5985 true scaffold_9: 10581590-10587574 Eutrema salsugineum
Thhalv10018971m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 10581590-10586589 Eutrema salsugineum
Thhalv10018971m.g 5.0kb downstream 5.0kb downstream 5985 true scaffold_9: 10586590-10592574 Eutrema salsugineum
Thhalv10018971m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 10587575-10592574 Eutrema salsugineum
Thhalv10018971m.g 10.0kb upstream 10.0kb upstream 10985 true scaffold_9: 10576590-10587574 Eutrema salsugineum
Thhalv10018971m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 10576590-10586589 Eutrema salsugineum
Thhalv10018971m.g 10.0kb downstream 10.0kb downstream 10985 true scaffold_9: 10586590-10597574 Eutrema salsugineum
Thhalv10018971m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 10587575-10597574 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377942 5261 Brassicaceae View MSA
123801680 5264 Brassicales-Malvales View MSA
124298956 5266 SBM View MSA
124150485 5268 Malvidae View MSA
123876086 5270 Rosid View MSA
123746840 5271 Pentapetalae View MSA
122794950 5272 Eudicot View MSA
122041743 5273 Angiosperm View MSA
123429161 5275 Viridiplantae View MSA
121350825 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain