Gene : Thhalv10019786m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR23344:SF28 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 Genomic Order:  946
Name:  ? Thhalv10019786m.g Secondary Identifier:  ? PAC:20191300
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7409 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10019786m.g 0.5kb upstream 0.5kb upstream 2382 true scaffold_9: 4030890-4033271 Eutrema salsugineum
Thhalv10019786m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4030890-4031389 Eutrema salsugineum
Thhalv10019786m.g 0.5kb downstream 0.5kb downstream 2382 true scaffold_9: 4031390-4033771 Eutrema salsugineum
Thhalv10019786m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4033272-4033771 Eutrema salsugineum
Thhalv10019786m.g 1.0kb upstream 1.0kb upstream 2882 true scaffold_9: 4030390-4033271 Eutrema salsugineum
Thhalv10019786m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4030390-4031389 Eutrema salsugineum
Thhalv10019786m.g 1.0kb downstream 1.0kb downstream 2882 true scaffold_9: 4031390-4034271 Eutrema salsugineum
Thhalv10019786m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4033272-4034271 Eutrema salsugineum
Thhalv10019786m.g 2.0kb upstream 2.0kb upstream 3882 true scaffold_9: 4029390-4033271 Eutrema salsugineum
Thhalv10019786m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4029390-4031389 Eutrema salsugineum
Thhalv10019786m.g 2.0kb downstream 2.0kb downstream 3882 true scaffold_9: 4031390-4035271 Eutrema salsugineum
Thhalv10019786m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4033272-4035271 Eutrema salsugineum
Thhalv10019786m.g 5.0kb upstream 5.0kb upstream 6882 true scaffold_9: 4026390-4033271 Eutrema salsugineum
Thhalv10019786m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4026390-4031389 Eutrema salsugineum
Thhalv10019786m.g 5.0kb downstream 5.0kb downstream 6882 true scaffold_9: 4031390-4038271 Eutrema salsugineum
Thhalv10019786m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4033272-4038271 Eutrema salsugineum
Thhalv10019786m.g 10.0kb upstream 10.0kb upstream 11882 true scaffold_9: 4021390-4033271 Eutrema salsugineum
Thhalv10019786m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4021390-4031389 Eutrema salsugineum
Thhalv10019786m.g 10.0kb downstream 10.0kb downstream 11882 true scaffold_9: 4031390-4043271 Eutrema salsugineum
Thhalv10019786m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4033272-4043271 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367757 5261 Brassicaceae View MSA
123834207 5264 Brassicales-Malvales View MSA
124341346 5266 SBM View MSA
124240087 5268 Malvidae View MSA
124067594 5270 Rosid View MSA
123739367 5271 Pentapetalae View MSA
122793263 5272 Eudicot View MSA
122047219 5273 Angiosperm View MSA
121349016 5274 Embryophyte View MSA
123427418 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain