Gene : Thhalv10019481m.g E. salsugineum v1.0
Defline:  (1 of 31) PTHR11945:SF183 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATED Genomic Order:  1649
Name:  ? Thhalv10019481m.g Secondary Identifier:  ? PAC:20191297
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10019481m.g 0.5kb upstream 0.5kb upstream 1011 true scaffold_9: 11629428-11630438 Eutrema salsugineum
Thhalv10019481m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 11629428-11629927 Eutrema salsugineum
Thhalv10019481m.g 0.5kb downstream 0.5kb downstream 1011 true scaffold_9: 11629928-11630938 Eutrema salsugineum
Thhalv10019481m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 11630439-11630938 Eutrema salsugineum
Thhalv10019481m.g 1.0kb upstream 1.0kb upstream 1511 true scaffold_9: 11628928-11630438 Eutrema salsugineum
Thhalv10019481m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 11628928-11629927 Eutrema salsugineum
Thhalv10019481m.g 1.0kb downstream 1.0kb downstream 1511 true scaffold_9: 11629928-11631438 Eutrema salsugineum
Thhalv10019481m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 11630439-11631438 Eutrema salsugineum
Thhalv10019481m.g 2.0kb upstream 2.0kb upstream 2511 true scaffold_9: 11627928-11630438 Eutrema salsugineum
Thhalv10019481m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 11627928-11629927 Eutrema salsugineum
Thhalv10019481m.g 2.0kb downstream 2.0kb downstream 2511 true scaffold_9: 11629928-11632438 Eutrema salsugineum
Thhalv10019481m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 11630439-11632438 Eutrema salsugineum
Thhalv10019481m.g 5.0kb upstream 5.0kb upstream 5511 true scaffold_9: 11624928-11630438 Eutrema salsugineum
Thhalv10019481m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 11624928-11629927 Eutrema salsugineum
Thhalv10019481m.g 5.0kb downstream 5.0kb downstream 5511 true scaffold_9: 11629928-11635438 Eutrema salsugineum
Thhalv10019481m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 11630439-11635438 Eutrema salsugineum
Thhalv10019481m.g 10.0kb upstream 10.0kb upstream 10511 true scaffold_9: 11619928-11630438 Eutrema salsugineum
Thhalv10019481m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 11619928-11629927 Eutrema salsugineum
Thhalv10019481m.g 10.0kb downstream 10.0kb downstream 10511 true scaffold_9: 11629928-11640438 Eutrema salsugineum
Thhalv10019481m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 11630439-11640438 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122359471 5261 Brassicaceae Singleton cluster - no MSA
123838585 5264 Brassicales-Malvales View MSA
124322479 5266 SBM View MSA
124254245 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain