Gene : Brdisv1Bd3-1_r1036962m.g B. distachyon Bd3-1 v1
Defline:  (1 of 1) K02718 - photosystem II PsbT protein (psbT) Genomic Order:  2167
Name:  ? Brdisv1Bd3-1_r1036962m.g Secondary Identifier:  ? PAC:33332242
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BdistachyonBd3-1 PHOTOALL-PWY Brachypodium distachyon Bd3-1 pathologic  
BdistachyonBd3-1 PWY-101 Brachypodium distachyon Bd3-1 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brdisv1Bd3-1_r1036962m.g 0.5kb upstream 0.5kb upstream 854 true pseudomolecule_7: 23687639-23688492 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 0.5kb upstream 0.5kb upstream 500 false pseudomolecule_7: 23687993-23688492 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 0.5kb downstream 0.5kb downstream 854 true pseudomolecule_7: 23687139-23687992 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 0.5kb downstream 0.5kb downstream 500 false pseudomolecule_7: 23687139-23687638 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 1.0kb upstream 1.0kb upstream 1354 true pseudomolecule_7: 23687639-23688992 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 1.0kb upstream 1.0kb upstream 1000 false pseudomolecule_7: 23687993-23688992 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 1.0kb downstream 1.0kb downstream 1354 true pseudomolecule_7: 23686639-23687992 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 1.0kb downstream 1.0kb downstream 1000 false pseudomolecule_7: 23686639-23687638 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 2.0kb upstream 2.0kb upstream 2354 true pseudomolecule_7: 23687639-23689992 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 2.0kb upstream 2.0kb upstream 2000 false pseudomolecule_7: 23687993-23689992 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 2.0kb downstream 2.0kb downstream 2354 true pseudomolecule_7: 23685639-23687992 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 2.0kb downstream 2.0kb downstream 2000 false pseudomolecule_7: 23685639-23687638 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 5.0kb upstream 5.0kb upstream 5354 true pseudomolecule_7: 23687639-23692992 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 5.0kb upstream 5.0kb upstream 5000 false pseudomolecule_7: 23687993-23692992 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 5.0kb downstream 5.0kb downstream 5354 true pseudomolecule_7: 23682639-23687992 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 5.0kb downstream 5.0kb downstream 5000 false pseudomolecule_7: 23682639-23687638 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 10.0kb upstream 10.0kb upstream 10354 true pseudomolecule_7: 23687639-23697992 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 10.0kb upstream 10.0kb upstream 10000 false pseudomolecule_7: 23687993-23697992 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 10.0kb downstream 10.0kb downstream 10354 true pseudomolecule_7: 23677639-23687992 Brachypodium distachyon Bd3-1
Brdisv1Bd3-1_r1036962m.g 10.0kb downstream 10.0kb downstream 10000 false pseudomolecule_7: 23677639-23687638 Brachypodium distachyon Bd3-1

1 Protein Family

Cluster ID Method ID Method Name Sequence Alignment
66110443 5043 BrachyPan View MSA

0 Rna Seq Expressions

1 Strain

DB identifier