Gene : Brdisv20Bd21Ref1021711m.g B. distachyon Bd21 AnntCtrl v1
Defline:  (1 of 21) PF04195 - Putative gypsy type transposon (Transposase_28) Genomic Order:  5182
Name:  ? Brdisv20Bd21Ref1021711m.g Secondary Identifier:  ? PAC:33428563
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brdisv20Bd21Ref1021711m.g 0.5kb upstream 0.5kb upstream 2440 true Bd2: 45911090-45913529 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 0.5kb upstream 0.5kb upstream 500 false Bd2: 45913030-45913529 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 0.5kb downstream 0.5kb downstream 2440 true Bd2: 45910590-45913029 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 0.5kb downstream 0.5kb downstream 500 false Bd2: 45910590-45911089 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 1.0kb upstream 1.0kb upstream 2940 true Bd2: 45911090-45914029 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 1.0kb upstream 1.0kb upstream 1000 false Bd2: 45913030-45914029 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 1.0kb downstream 1.0kb downstream 2940 true Bd2: 45910090-45913029 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 1.0kb downstream 1.0kb downstream 1000 false Bd2: 45910090-45911089 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 2.0kb upstream 2.0kb upstream 3940 true Bd2: 45911090-45915029 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 2.0kb upstream 2.0kb upstream 2000 false Bd2: 45913030-45915029 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 2.0kb downstream 2.0kb downstream 3940 true Bd2: 45909090-45913029 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 2.0kb downstream 2.0kb downstream 2000 false Bd2: 45909090-45911089 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 5.0kb upstream 5.0kb upstream 6940 true Bd2: 45911090-45918029 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 5.0kb upstream 5.0kb upstream 5000 false Bd2: 45913030-45918029 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 5.0kb downstream 5.0kb downstream 6940 true Bd2: 45906090-45913029 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 5.0kb downstream 5.0kb downstream 5000 false Bd2: 45906090-45911089 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 10.0kb upstream 10.0kb upstream 11940 true Bd2: 45911090-45923029 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 10.0kb upstream 10.0kb upstream 10000 false Bd2: 45913030-45923029 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 10.0kb downstream 10.0kb downstream 11940 true Bd2: 45901090-45913029 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1021711m.g 10.0kb downstream 10.0kb downstream 10000 false Bd2: 45901090-45911089 Brachypodium distachyon Bd21 AnntCtrl

1 Protein Family

Cluster ID Method ID Method Name Sequence Alignment
66117678 5043 BrachyPan View MSA

0 Rna Seq Expressions

1 Strain

DB identifier