Gene : Brdisv20Bd21Ref1003055m.g B. distachyon Bd21 AnntCtrl v1
Defline:  (1 of 1) K02256 - cytochrome c oxidase subunit 1 (COX1) Genomic Order:  2065
Name:  ? Brdisv20Bd21Ref1003055m.g Secondary Identifier:  ? PAC:33444751
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BdistachyonBd21Refv2 PWY-3781 Brachypodium distachyon Bd21 AnntCtrl pathologic  
BdistachyonBd21Refv2 PWY-7279 Brachypodium distachyon Bd21 AnntCtrl pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brdisv20Bd21Ref1003055m.g 0.5kb upstream 0.5kb upstream 2016 true Bd1: 14089969-14091984 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 0.5kb upstream 0.5kb upstream 500 false Bd1: 14091485-14091984 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 0.5kb downstream 0.5kb downstream 2016 true Bd1: 14089469-14091484 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 0.5kb downstream 0.5kb downstream 500 false Bd1: 14089469-14089968 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 1.0kb upstream 1.0kb upstream 2516 true Bd1: 14089969-14092484 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 1.0kb upstream 1.0kb upstream 1000 false Bd1: 14091485-14092484 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 1.0kb downstream 1.0kb downstream 2516 true Bd1: 14088969-14091484 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 1.0kb downstream 1.0kb downstream 1000 false Bd1: 14088969-14089968 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 2.0kb upstream 2.0kb upstream 3516 true Bd1: 14089969-14093484 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 2.0kb upstream 2.0kb upstream 2000 false Bd1: 14091485-14093484 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 2.0kb downstream 2.0kb downstream 3516 true Bd1: 14087969-14091484 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 2.0kb downstream 2.0kb downstream 2000 false Bd1: 14087969-14089968 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 5.0kb upstream 5.0kb upstream 6516 true Bd1: 14089969-14096484 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 5.0kb upstream 5.0kb upstream 5000 false Bd1: 14091485-14096484 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 5.0kb downstream 5.0kb downstream 6516 true Bd1: 14084969-14091484 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 5.0kb downstream 5.0kb downstream 5000 false Bd1: 14084969-14089968 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 10.0kb upstream 10.0kb upstream 11516 true Bd1: 14089969-14101484 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 10.0kb upstream 10.0kb upstream 10000 false Bd1: 14091485-14101484 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 10.0kb downstream 10.0kb downstream 11516 true Bd1: 14079969-14091484 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1003055m.g 10.0kb downstream 10.0kb downstream 10000 false Bd1: 14079969-14089968 Brachypodium distachyon Bd21 AnntCtrl

1 Protein Family

Cluster ID Method ID Method Name Sequence Alignment
66115779 5043 BrachyPan View MSA

0 Rna Seq Expressions

1 Strain

DB identifier