Gene : Brdisv20Bd21Ref1009970m.g B. distachyon Bd21 AnntCtrl v1
Defline:  (1 of 1) K02706 - photosystem II P680 reaction center D2 protein (psbD) Genomic Order:  6762
Name:  ? Brdisv20Bd21Ref1009970m.g Secondary Identifier:  ? PAC:33448960
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BdistachyonBd21Refv2 PHOTOALL-PWY Brachypodium distachyon Bd21 AnntCtrl pathologic  
BdistachyonBd21Refv2 PWY-101 Brachypodium distachyon Bd21 AnntCtrl pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brdisv20Bd21Ref1009970m.g 0.5kb upstream 0.5kb upstream 1432 true Bd1: 54998584-55000015 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 0.5kb upstream 0.5kb upstream 500 false Bd1: 54999516-55000015 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 0.5kb downstream 0.5kb downstream 1432 true Bd1: 54998084-54999515 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 0.5kb downstream 0.5kb downstream 500 false Bd1: 54998084-54998583 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 1.0kb upstream 1.0kb upstream 1932 true Bd1: 54998584-55000515 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 1.0kb upstream 1.0kb upstream 1000 false Bd1: 54999516-55000515 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 1.0kb downstream 1.0kb downstream 1932 true Bd1: 54997584-54999515 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 1.0kb downstream 1.0kb downstream 1000 false Bd1: 54997584-54998583 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 2.0kb upstream 2.0kb upstream 2932 true Bd1: 54998584-55001515 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 2.0kb upstream 2.0kb upstream 2000 false Bd1: 54999516-55001515 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 2.0kb downstream 2.0kb downstream 2932 true Bd1: 54996584-54999515 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 2.0kb downstream 2.0kb downstream 2000 false Bd1: 54996584-54998583 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 5.0kb upstream 5.0kb upstream 5932 true Bd1: 54998584-55004515 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 5.0kb upstream 5.0kb upstream 5000 false Bd1: 54999516-55004515 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 5.0kb downstream 5.0kb downstream 5932 true Bd1: 54993584-54999515 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 5.0kb downstream 5.0kb downstream 5000 false Bd1: 54993584-54998583 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 10.0kb upstream 10.0kb upstream 10932 true Bd1: 54998584-55009515 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 10.0kb upstream 10.0kb upstream 10000 false Bd1: 54999516-55009515 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 10.0kb downstream 10.0kb downstream 10932 true Bd1: 54988584-54999515 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1009970m.g 10.0kb downstream 10.0kb downstream 10000 false Bd1: 54988584-54998583 Brachypodium distachyon Bd21 AnntCtrl

1 Protein Family

Cluster ID Method ID Method Name Sequence Alignment
66112302 5043 BrachyPan View MSA

0 Rna Seq Expressions

1 Strain

DB identifier