Gene : Brdisv1pangenome1007080m.g B. distachyon Pangenome v1

Defline:  (1 of 3) PTHR10314//PTHR10314:SF1 - SER/THR DEHYDRATASE, TRP SYNTHASE // THREONINE SYNTHASE-LIKE 2 Genomic Order:  2
Name:  ? Brdisv1pangenome1007080m.g Secondary Identifier:  ? PAC:33620633

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyonpangenome HOMOSER-THRESYN-PWY Brachypodium distachyon Pangenome pathologic  
Bdistachyonpangenome PWY-3001 Brachypodium distachyon Pangenome pathologic  
Bdistachyonpangenome PWY-724 Brachypodium distachyon Pangenome pathologic  
Bdistachyonpangenome THRESYN-PWY Brachypodium distachyon Pangenome pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brdisv1pangenome1007080m.g 0.5kb upstream 0.5kb upstream 1880 true 6_13861620_15825: 7056-8935 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 0.5kb upstream 0.5kb upstream 500 false 6_13861620_15825: 8436-8935 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 0.5kb downstream 0.5kb downstream 1880 true 6_13861620_15825: 6556-8435 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 0.5kb downstream 0.5kb downstream 500 false 6_13861620_15825: 6556-7055 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 1.0kb upstream 1.0kb upstream 2380 true 6_13861620_15825: 7056-9435 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 1.0kb upstream 1.0kb upstream 1000 false 6_13861620_15825: 8436-9435 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 1.0kb downstream 1.0kb downstream 2380 true 6_13861620_15825: 6056-8435 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 1.0kb downstream 1.0kb downstream 1000 false 6_13861620_15825: 6056-7055 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 2.0kb upstream 2.0kb upstream 3380 true 6_13861620_15825: 7056-10435 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 2.0kb upstream 2.0kb upstream 2000 false 6_13861620_15825: 8436-10435 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 2.0kb downstream 2.0kb downstream 3380 true 6_13861620_15825: 5056-8435 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 2.0kb downstream 2.0kb downstream 2000 false 6_13861620_15825: 5056-7055 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 5.0kb upstream 5.0kb upstream 6380 true 6_13861620_15825: 7056-13435 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 5.0kb upstream 5.0kb upstream 5000 false 6_13861620_15825: 8436-13435 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 5.0kb downstream 5.0kb downstream 6380 true 6_13861620_15825: 2056-8435 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 5.0kb downstream 5.0kb downstream 5000 false 6_13861620_15825: 2056-7055 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 10.0kb upstream 10.0kb upstream 8770 true 6_13861620_15825: 7056-15825 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 10.0kb upstream 10.0kb upstream 7390 false 6_13861620_15825: 8436-15825 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 10.0kb downstream 10.0kb downstream 8435 true 6_13861620_15825: 1-8435 Brachypodium distachyon Pangenome
Brdisv1pangenome1007080m.g 10.0kb downstream 10.0kb downstream 7055 false 6_13861620_15825: 1-7055 Brachypodium distachyon Pangenome

0 Protein Family

0 Rna Seq Expressions

1 Strain

DB identifier