Gene : Ciclev10000874m.g C. clementina v1.0
Defline:  (1 of 1) PTHR21089//PTHR21089:SF10 - SHIKIMATE DEHYDROGENASE Genomic Order:  1398
Name:  ? Ciclev10000874m.g Secondary Identifier:  ? PAC:20785404
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina ARO-PWY Citrus clementina pathologic  
Cclementina PWY-6163 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10000874m.g 0.5kb upstream 0.5kb upstream 4775 true scaffold_5: 31403227-31408001 Citrus clementina
Ciclev10000874m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 31403227-31403726 Citrus clementina
Ciclev10000874m.g 0.5kb downstream 0.5kb downstream 4775 true scaffold_5: 31403727-31408501 Citrus clementina
Ciclev10000874m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 31408002-31408501 Citrus clementina
Ciclev10000874m.g 1.0kb upstream 1.0kb upstream 5275 true scaffold_5: 31402727-31408001 Citrus clementina
Ciclev10000874m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 31402727-31403726 Citrus clementina
Ciclev10000874m.g 1.0kb downstream 1.0kb downstream 5275 true scaffold_5: 31403727-31409001 Citrus clementina
Ciclev10000874m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 31408002-31409001 Citrus clementina
Ciclev10000874m.g 2.0kb upstream 2.0kb upstream 6275 true scaffold_5: 31401727-31408001 Citrus clementina
Ciclev10000874m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 31401727-31403726 Citrus clementina
Ciclev10000874m.g 2.0kb downstream 2.0kb downstream 6275 true scaffold_5: 31403727-31410001 Citrus clementina
Ciclev10000874m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 31408002-31410001 Citrus clementina
Ciclev10000874m.g 5.0kb upstream 5.0kb upstream 9275 true scaffold_5: 31398727-31408001 Citrus clementina
Ciclev10000874m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 31398727-31403726 Citrus clementina
Ciclev10000874m.g 5.0kb downstream 5.0kb downstream 9275 true scaffold_5: 31403727-31413001 Citrus clementina
Ciclev10000874m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 31408002-31413001 Citrus clementina
Ciclev10000874m.g 10.0kb upstream 10.0kb upstream 14275 true scaffold_5: 31393727-31408001 Citrus clementina
Ciclev10000874m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 31393727-31403726 Citrus clementina
Ciclev10000874m.g 10.0kb downstream 10.0kb downstream 14275 true scaffold_5: 31403727-31418001 Citrus clementina
Ciclev10000874m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 31408002-31418001 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791917 5273 Angiosperm View MSA
124348825 5266 SBM View MSA
124246373 5268 Malvidae View MSA
124070168 5270 Rosid View MSA
123749206 5271 Pentapetalae View MSA
122795293 5272 Eudicot View MSA
121063186 5274 Embryophyte View MSA
123102956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain