Gene : Ciclev10000656m.g C. clementina v1.0
Defline:  (1 of 1) PTHR11680:SF7 - SERINE HYDROXYMETHYLTRANSFERASE 6-RELATED Genomic Order:  2046
Name:  ? Ciclev10000656m.g Secondary Identifier:  ? PAC:20786199
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina GLYSYN-PWY Citrus clementina pathologic  
Cclementina PWY-2161 Citrus clementina pathologic  
Cclementina PWY-3841 Citrus clementina pathologic  
Cclementina SER-GLYSYN-PWY Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10000656m.g 0.5kb upstream 0.5kb upstream 5541 true scaffold_5: 36848457-36853997 Citrus clementina
Ciclev10000656m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 36853498-36853997 Citrus clementina
Ciclev10000656m.g 0.5kb downstream 0.5kb downstream 5541 true scaffold_5: 36847957-36853497 Citrus clementina
Ciclev10000656m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 36847957-36848456 Citrus clementina
Ciclev10000656m.g 1.0kb upstream 1.0kb upstream 6041 true scaffold_5: 36848457-36854497 Citrus clementina
Ciclev10000656m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 36853498-36854497 Citrus clementina
Ciclev10000656m.g 1.0kb downstream 1.0kb downstream 6041 true scaffold_5: 36847457-36853497 Citrus clementina
Ciclev10000656m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 36847457-36848456 Citrus clementina
Ciclev10000656m.g 2.0kb upstream 2.0kb upstream 7041 true scaffold_5: 36848457-36855497 Citrus clementina
Ciclev10000656m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 36853498-36855497 Citrus clementina
Ciclev10000656m.g 2.0kb downstream 2.0kb downstream 7041 true scaffold_5: 36846457-36853497 Citrus clementina
Ciclev10000656m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 36846457-36848456 Citrus clementina
Ciclev10000656m.g 5.0kb upstream 5.0kb upstream 10041 true scaffold_5: 36848457-36858497 Citrus clementina
Ciclev10000656m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 36853498-36858497 Citrus clementina
Ciclev10000656m.g 5.0kb downstream 5.0kb downstream 10041 true scaffold_5: 36843457-36853497 Citrus clementina
Ciclev10000656m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 36843457-36848456 Citrus clementina
Ciclev10000656m.g 10.0kb upstream 10.0kb upstream 15041 true scaffold_5: 36848457-36863497 Citrus clementina
Ciclev10000656m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 36853498-36863497 Citrus clementina
Ciclev10000656m.g 10.0kb downstream 10.0kb downstream 15041 true scaffold_5: 36838457-36853497 Citrus clementina
Ciclev10000656m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 36838457-36848456 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343045 5266 SBM View MSA
124253011 5268 Malvidae View MSA
124069560 5270 Rosid View MSA
123741866 5271 Pentapetalae View MSA
122787051 5272 Eudicot View MSA
122046261 5273 Angiosperm View MSA
121345900 5274 Embryophyte View MSA
123426459 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain