Gene : Ciclev10001030m.g C. clementina v1.0
Defline:  (1 of 3) 1.2.4.4 - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) / Dehydrogenase, branched chain alpha-keto acid Genomic Order:  2212
Name:  ? Ciclev10001030m.g Secondary Identifier:  ? PAC:20788355
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-5046 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10001030m.g 0.5kb upstream 0.5kb upstream 5574 true scaffold_5: 38090039-38095612 Citrus clementina
Ciclev10001030m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38090039-38090538 Citrus clementina
Ciclev10001030m.g 0.5kb downstream 0.5kb downstream 5574 true scaffold_5: 38090539-38096112 Citrus clementina
Ciclev10001030m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38095613-38096112 Citrus clementina
Ciclev10001030m.g 1.0kb upstream 1.0kb upstream 6074 true scaffold_5: 38089539-38095612 Citrus clementina
Ciclev10001030m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38089539-38090538 Citrus clementina
Ciclev10001030m.g 1.0kb downstream 1.0kb downstream 6074 true scaffold_5: 38090539-38096612 Citrus clementina
Ciclev10001030m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38095613-38096612 Citrus clementina
Ciclev10001030m.g 2.0kb upstream 2.0kb upstream 7074 true scaffold_5: 38088539-38095612 Citrus clementina
Ciclev10001030m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38088539-38090538 Citrus clementina
Ciclev10001030m.g 2.0kb downstream 2.0kb downstream 7074 true scaffold_5: 38090539-38097612 Citrus clementina
Ciclev10001030m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 38095613-38097612 Citrus clementina
Ciclev10001030m.g 5.0kb upstream 5.0kb upstream 10074 true scaffold_5: 38085539-38095612 Citrus clementina
Ciclev10001030m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38085539-38090538 Citrus clementina
Ciclev10001030m.g 5.0kb downstream 5.0kb downstream 10074 true scaffold_5: 38090539-38100612 Citrus clementina
Ciclev10001030m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 38095613-38100612 Citrus clementina
Ciclev10001030m.g 10.0kb upstream 10.0kb upstream 15074 true scaffold_5: 38080539-38095612 Citrus clementina
Ciclev10001030m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38080539-38090538 Citrus clementina
Ciclev10001030m.g 10.0kb downstream 10.0kb downstream 15074 true scaffold_5: 38090539-38105612 Citrus clementina
Ciclev10001030m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 38095613-38105612 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124348231 5266 SBM View MSA
124244585 5268 Malvidae View MSA
124064753 5270 Rosid View MSA
123750640 5271 Pentapetalae View MSA
122791863 5272 Eudicot View MSA
122044172 5273 Angiosperm View MSA
121346270 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain