Gene : Ciclev10011230m.g C. clementina v1.0
Defline:  (1 of 1) PTHR10668:SF5 - BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 2 Genomic Order:  1268
Name:  ? Ciclev10011230m.g Secondary Identifier:  ? PAC:20796675
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina CAROTENOID-PWY Citrus clementina pathologic  
Cclementina PWY-6475 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10011230m.g 0.5kb upstream 0.5kb upstream 5797 true scaffold_6: 19578179-19583975 Citrus clementina
Ciclev10011230m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 19583476-19583975 Citrus clementina
Ciclev10011230m.g 0.5kb downstream 0.5kb downstream 5797 true scaffold_6: 19577679-19583475 Citrus clementina
Ciclev10011230m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 19577679-19578178 Citrus clementina
Ciclev10011230m.g 1.0kb upstream 1.0kb upstream 6297 true scaffold_6: 19578179-19584475 Citrus clementina
Ciclev10011230m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 19583476-19584475 Citrus clementina
Ciclev10011230m.g 1.0kb downstream 1.0kb downstream 6297 true scaffold_6: 19577179-19583475 Citrus clementina
Ciclev10011230m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 19577179-19578178 Citrus clementina
Ciclev10011230m.g 2.0kb upstream 2.0kb upstream 7297 true scaffold_6: 19578179-19585475 Citrus clementina
Ciclev10011230m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 19583476-19585475 Citrus clementina
Ciclev10011230m.g 2.0kb downstream 2.0kb downstream 7297 true scaffold_6: 19576179-19583475 Citrus clementina
Ciclev10011230m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 19576179-19578178 Citrus clementina
Ciclev10011230m.g 5.0kb upstream 5.0kb upstream 10297 true scaffold_6: 19578179-19588475 Citrus clementina
Ciclev10011230m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 19583476-19588475 Citrus clementina
Ciclev10011230m.g 5.0kb downstream 5.0kb downstream 10297 true scaffold_6: 19573179-19583475 Citrus clementina
Ciclev10011230m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 19573179-19578178 Citrus clementina
Ciclev10011230m.g 10.0kb upstream 10.0kb upstream 15297 true scaffold_6: 19578179-19593475 Citrus clementina
Ciclev10011230m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 19583476-19593475 Citrus clementina
Ciclev10011230m.g 10.0kb downstream 10.0kb downstream 15297 true scaffold_6: 19568179-19583475 Citrus clementina
Ciclev10011230m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 19568179-19578178 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026345 5273 Angiosperm View MSA
124343687 5266 SBM View MSA
124242220 5268 Malvidae View MSA
124064637 5270 Rosid View MSA
123738016 5271 Pentapetalae View MSA
122791420 5272 Eudicot View MSA
121345795 5274 Embryophyte View MSA
123425130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain