Gene : Ciclev10010940m.g C. clementina v1.0
Defline:  (1 of 7) PTHR11254 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE Genomic Order:  1513
Name:  ? Ciclev10010940m.g Secondary Identifier:  ? PAC:20798840
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-7511 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10010940m.g 0.5kb upstream 0.5kb upstream 9641 true scaffold_6: 21290966-21300606 Citrus clementina
Ciclev10010940m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 21300107-21300606 Citrus clementina
Ciclev10010940m.g 0.5kb downstream 0.5kb downstream 9641 true scaffold_6: 21290466-21300106 Citrus clementina
Ciclev10010940m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 21290466-21290965 Citrus clementina
Ciclev10010940m.g 1.0kb upstream 1.0kb upstream 10141 true scaffold_6: 21290966-21301106 Citrus clementina
Ciclev10010940m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 21300107-21301106 Citrus clementina
Ciclev10010940m.g 1.0kb downstream 1.0kb downstream 10141 true scaffold_6: 21289966-21300106 Citrus clementina
Ciclev10010940m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 21289966-21290965 Citrus clementina
Ciclev10010940m.g 2.0kb upstream 2.0kb upstream 11141 true scaffold_6: 21290966-21302106 Citrus clementina
Ciclev10010940m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 21300107-21302106 Citrus clementina
Ciclev10010940m.g 2.0kb downstream 2.0kb downstream 11141 true scaffold_6: 21288966-21300106 Citrus clementina
Ciclev10010940m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 21288966-21290965 Citrus clementina
Ciclev10010940m.g 5.0kb upstream 5.0kb upstream 14141 true scaffold_6: 21290966-21305106 Citrus clementina
Ciclev10010940m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 21300107-21305106 Citrus clementina
Ciclev10010940m.g 5.0kb downstream 5.0kb downstream 14141 true scaffold_6: 21285966-21300106 Citrus clementina
Ciclev10010940m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 21285966-21290965 Citrus clementina
Ciclev10010940m.g 10.0kb upstream 10.0kb upstream 19141 true scaffold_6: 21290966-21310106 Citrus clementina
Ciclev10010940m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 21300107-21310106 Citrus clementina
Ciclev10010940m.g 10.0kb downstream 10.0kb downstream 19141 true scaffold_6: 21280966-21300106 Citrus clementina
Ciclev10010940m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 21280966-21290965 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124346572 5266 SBM View MSA
124252639 5268 Malvidae View MSA
124065760 5270 Rosid View MSA
123737097 5271 Pentapetalae View MSA
122793139 5272 Eudicot View MSA
122047566 5273 Angiosperm View MSA
123429069 5275 Viridiplantae View MSA
121351552 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain