Gene : Ciclev10012305m.g C. clementina v1.0
Defline:  (1 of 3) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  1203
Name:  ? Ciclev10012305m.g Secondary Identifier:  ? PAC:20797749
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-7511 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10012305m.g 0.5kb upstream 0.5kb upstream 4115 true scaffold_6: 19092624-19096738 Citrus clementina
Ciclev10012305m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 19092624-19093123 Citrus clementina
Ciclev10012305m.g 0.5kb downstream 0.5kb downstream 4115 true scaffold_6: 19093124-19097238 Citrus clementina
Ciclev10012305m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 19096739-19097238 Citrus clementina
Ciclev10012305m.g 1.0kb upstream 1.0kb upstream 4615 true scaffold_6: 19092124-19096738 Citrus clementina
Ciclev10012305m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 19092124-19093123 Citrus clementina
Ciclev10012305m.g 1.0kb downstream 1.0kb downstream 4615 true scaffold_6: 19093124-19097738 Citrus clementina
Ciclev10012305m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 19096739-19097738 Citrus clementina
Ciclev10012305m.g 2.0kb upstream 2.0kb upstream 5615 true scaffold_6: 19091124-19096738 Citrus clementina
Ciclev10012305m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 19091124-19093123 Citrus clementina
Ciclev10012305m.g 2.0kb downstream 2.0kb downstream 5615 true scaffold_6: 19093124-19098738 Citrus clementina
Ciclev10012305m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 19096739-19098738 Citrus clementina
Ciclev10012305m.g 5.0kb upstream 5.0kb upstream 8615 true scaffold_6: 19088124-19096738 Citrus clementina
Ciclev10012305m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 19088124-19093123 Citrus clementina
Ciclev10012305m.g 5.0kb downstream 5.0kb downstream 8615 true scaffold_6: 19093124-19101738 Citrus clementina
Ciclev10012305m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 19096739-19101738 Citrus clementina
Ciclev10012305m.g 10.0kb upstream 10.0kb upstream 13615 true scaffold_6: 19083124-19096738 Citrus clementina
Ciclev10012305m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 19083124-19093123 Citrus clementina
Ciclev10012305m.g 10.0kb downstream 10.0kb downstream 13615 true scaffold_6: 19093124-19106738 Citrus clementina
Ciclev10012305m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 19096739-19106738 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344674 5266 SBM View MSA
124246222 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain