Gene : Ciclev10012173m.g C. clementina v1.0
Defline:  (1 of 2) PTHR12725:SF72 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Genomic Order:  611
Name:  ? Ciclev10012173m.g Secondary Identifier:  ? PAC:20798301
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-7204 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10012173m.g 0.5kb upstream 0.5kb upstream 3962 true scaffold_6: 14318185-14322146 Citrus clementina
Ciclev10012173m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 14321647-14322146 Citrus clementina
Ciclev10012173m.g 0.5kb downstream 0.5kb downstream 3962 true scaffold_6: 14317685-14321646 Citrus clementina
Ciclev10012173m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 14317685-14318184 Citrus clementina
Ciclev10012173m.g 1.0kb upstream 1.0kb upstream 4462 true scaffold_6: 14318185-14322646 Citrus clementina
Ciclev10012173m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 14321647-14322646 Citrus clementina
Ciclev10012173m.g 1.0kb downstream 1.0kb downstream 4462 true scaffold_6: 14317185-14321646 Citrus clementina
Ciclev10012173m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 14317185-14318184 Citrus clementina
Ciclev10012173m.g 2.0kb upstream 2.0kb upstream 5462 true scaffold_6: 14318185-14323646 Citrus clementina
Ciclev10012173m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 14321647-14323646 Citrus clementina
Ciclev10012173m.g 2.0kb downstream 2.0kb downstream 5462 true scaffold_6: 14316185-14321646 Citrus clementina
Ciclev10012173m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14316185-14318184 Citrus clementina
Ciclev10012173m.g 5.0kb upstream 5.0kb upstream 8462 true scaffold_6: 14318185-14326646 Citrus clementina
Ciclev10012173m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 14321647-14326646 Citrus clementina
Ciclev10012173m.g 5.0kb downstream 5.0kb downstream 8462 true scaffold_6: 14313185-14321646 Citrus clementina
Ciclev10012173m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14313185-14318184 Citrus clementina
Ciclev10012173m.g 10.0kb upstream 10.0kb upstream 13462 true scaffold_6: 14318185-14331646 Citrus clementina
Ciclev10012173m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 14321647-14331646 Citrus clementina
Ciclev10012173m.g 10.0kb downstream 10.0kb downstream 13462 true scaffold_6: 14308185-14321646 Citrus clementina
Ciclev10012173m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14308185-14318184 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124350417 5266 SBM View MSA
124254189 5268 Malvidae View MSA
124070818 5270 Rosid View MSA
123749879 5271 Pentapetalae View MSA
122794790 5272 Eudicot View MSA
122045450 5273 Angiosperm View MSA
121348248 5274 Embryophyte View MSA
123426890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain