Gene : Ciclev10011985m.g C. clementina v1.0
Defline:  (1 of 1) PTHR11048:SF18 - CHLOROPHYLL SYNTHASE, CHLOROPLASTIC Genomic Order:  840
Name:  ? Ciclev10011985m.g Secondary Identifier:  ? PAC:20797077
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-5064 Citrus clementina pathologic  
Cclementina PWY-5068 Citrus clementina pathologic  
Cclementina PWY-5086 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10011985m.g 0.5kb upstream 0.5kb upstream 5216 true scaffold_6: 16614257-16619472 Citrus clementina
Ciclev10011985m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 16614257-16614756 Citrus clementina
Ciclev10011985m.g 0.5kb downstream 0.5kb downstream 5216 true scaffold_6: 16614757-16619972 Citrus clementina
Ciclev10011985m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 16619473-16619972 Citrus clementina
Ciclev10011985m.g 1.0kb upstream 1.0kb upstream 5716 true scaffold_6: 16613757-16619472 Citrus clementina
Ciclev10011985m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 16613757-16614756 Citrus clementina
Ciclev10011985m.g 1.0kb downstream 1.0kb downstream 5716 true scaffold_6: 16614757-16620472 Citrus clementina
Ciclev10011985m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 16619473-16620472 Citrus clementina
Ciclev10011985m.g 2.0kb upstream 2.0kb upstream 6716 true scaffold_6: 16612757-16619472 Citrus clementina
Ciclev10011985m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 16612757-16614756 Citrus clementina
Ciclev10011985m.g 2.0kb downstream 2.0kb downstream 6716 true scaffold_6: 16614757-16621472 Citrus clementina
Ciclev10011985m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 16619473-16621472 Citrus clementina
Ciclev10011985m.g 5.0kb upstream 5.0kb upstream 9716 true scaffold_6: 16609757-16619472 Citrus clementina
Ciclev10011985m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 16609757-16614756 Citrus clementina
Ciclev10011985m.g 5.0kb downstream 5.0kb downstream 9716 true scaffold_6: 16614757-16624472 Citrus clementina
Ciclev10011985m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 16619473-16624472 Citrus clementina
Ciclev10011985m.g 10.0kb upstream 10.0kb upstream 14716 true scaffold_6: 16604757-16619472 Citrus clementina
Ciclev10011985m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 16604757-16614756 Citrus clementina
Ciclev10011985m.g 10.0kb downstream 10.0kb downstream 14716 true scaffold_6: 16614757-16629472 Citrus clementina
Ciclev10011985m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 16619473-16629472 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343862 5266 SBM View MSA
124242139 5268 Malvidae View MSA
124067560 5270 Rosid View MSA
123737432 5271 Pentapetalae View MSA
122786780 5272 Eudicot View MSA
122042815 5273 Angiosperm View MSA
121346314 5274 Embryophyte View MSA
123424294 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain