Gene : Ciclev10013662m.g C. clementina v1.0
Defline:  (1 of 2) PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Genomic Order:  814
Name:  ? Ciclev10013662m.g Secondary Identifier:  ? PAC:20799063
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-7511 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10013662m.g 0.5kb upstream 0.5kb upstream 4746 true scaffold_6: 16378358-16383103 Citrus clementina
Ciclev10013662m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 16378358-16378857 Citrus clementina
Ciclev10013662m.g 0.5kb downstream 0.5kb downstream 4746 true scaffold_6: 16378858-16383603 Citrus clementina
Ciclev10013662m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 16383104-16383603 Citrus clementina
Ciclev10013662m.g 1.0kb upstream 1.0kb upstream 5246 true scaffold_6: 16377858-16383103 Citrus clementina
Ciclev10013662m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 16377858-16378857 Citrus clementina
Ciclev10013662m.g 1.0kb downstream 1.0kb downstream 5246 true scaffold_6: 16378858-16384103 Citrus clementina
Ciclev10013662m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 16383104-16384103 Citrus clementina
Ciclev10013662m.g 2.0kb upstream 2.0kb upstream 6246 true scaffold_6: 16376858-16383103 Citrus clementina
Ciclev10013662m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 16376858-16378857 Citrus clementina
Ciclev10013662m.g 2.0kb downstream 2.0kb downstream 6246 true scaffold_6: 16378858-16385103 Citrus clementina
Ciclev10013662m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 16383104-16385103 Citrus clementina
Ciclev10013662m.g 5.0kb upstream 5.0kb upstream 9246 true scaffold_6: 16373858-16383103 Citrus clementina
Ciclev10013662m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 16373858-16378857 Citrus clementina
Ciclev10013662m.g 5.0kb downstream 5.0kb downstream 9246 true scaffold_6: 16378858-16388103 Citrus clementina
Ciclev10013662m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 16383104-16388103 Citrus clementina
Ciclev10013662m.g 10.0kb upstream 10.0kb upstream 14246 true scaffold_6: 16368858-16383103 Citrus clementina
Ciclev10013662m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 16368858-16378857 Citrus clementina
Ciclev10013662m.g 10.0kb downstream 10.0kb downstream 14246 true scaffold_6: 16378858-16393103 Citrus clementina
Ciclev10013662m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 16383104-16393103 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122792833 5272 Eudicot View MSA
124344193 5266 SBM View MSA
124250832 5268 Malvidae View MSA
124070780 5270 Rosid View MSA
123741557 5271 Pentapetalae View MSA
122042274 5273 Angiosperm View MSA
121349312 5274 Embryophyte View MSA
123381271 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain