Gene : Ciclev10028310m.g C. clementina v1.0
Defline:  (1 of 1) PTHR11538:SF40 - PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT Genomic Order:  640
Name:  ? Ciclev10028310m.g Secondary Identifier:  ? PAC:20813622
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina TRNA-CHARGING-PWY Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10028310m.g 0.5kb upstream 0.5kb upstream 5487 true scaffold_8: 4953407-4958893 Citrus clementina
Ciclev10028310m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 4953407-4953906 Citrus clementina
Ciclev10028310m.g 0.5kb downstream 0.5kb downstream 5487 true scaffold_8: 4953907-4959393 Citrus clementina
Ciclev10028310m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 4958894-4959393 Citrus clementina
Ciclev10028310m.g 1.0kb upstream 1.0kb upstream 5987 true scaffold_8: 4952907-4958893 Citrus clementina
Ciclev10028310m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 4952907-4953906 Citrus clementina
Ciclev10028310m.g 1.0kb downstream 1.0kb downstream 5987 true scaffold_8: 4953907-4959893 Citrus clementina
Ciclev10028310m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 4958894-4959893 Citrus clementina
Ciclev10028310m.g 2.0kb upstream 2.0kb upstream 6987 true scaffold_8: 4951907-4958893 Citrus clementina
Ciclev10028310m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 4951907-4953906 Citrus clementina
Ciclev10028310m.g 2.0kb downstream 2.0kb downstream 6987 true scaffold_8: 4953907-4960893 Citrus clementina
Ciclev10028310m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 4958894-4960893 Citrus clementina
Ciclev10028310m.g 5.0kb upstream 5.0kb upstream 9987 true scaffold_8: 4948907-4958893 Citrus clementina
Ciclev10028310m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 4948907-4953906 Citrus clementina
Ciclev10028310m.g 5.0kb downstream 5.0kb downstream 9987 true scaffold_8: 4953907-4963893 Citrus clementina
Ciclev10028310m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 4958894-4963893 Citrus clementina
Ciclev10028310m.g 10.0kb upstream 10.0kb upstream 14987 true scaffold_8: 4943907-4958893 Citrus clementina
Ciclev10028310m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 4943907-4953906 Citrus clementina
Ciclev10028310m.g 10.0kb downstream 10.0kb downstream 14987 true scaffold_8: 4953907-4968893 Citrus clementina
Ciclev10028310m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 4958894-4968893 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040985 5273 Angiosperm View MSA
124337163 5266 SBM View MSA
124242019 5268 Malvidae View MSA
124067851 5270 Rosid View MSA
123744864 5271 Pentapetalae View MSA
122791100 5272 Eudicot View MSA
121346168 5274 Embryophyte View MSA
123424573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain