Gene : Ciclev10030212m.g C. clementina v1.0
Defline:  (1 of 24) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) Genomic Order:  1083
Name:  ? Ciclev10030212m.g Secondary Identifier:  ? PAC:20813457
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10030212m.g 0.5kb upstream 0.5kb upstream 1040 true scaffold_8: 14364562-14365601 Citrus clementina
Ciclev10030212m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 14364562-14365061 Citrus clementina
Ciclev10030212m.g 0.5kb downstream 0.5kb downstream 1040 true scaffold_8: 14365062-14366101 Citrus clementina
Ciclev10030212m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 14365602-14366101 Citrus clementina
Ciclev10030212m.g 1.0kb upstream 1.0kb upstream 1540 true scaffold_8: 14364062-14365601 Citrus clementina
Ciclev10030212m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 14364062-14365061 Citrus clementina
Ciclev10030212m.g 1.0kb downstream 1.0kb downstream 1540 true scaffold_8: 14365062-14366601 Citrus clementina
Ciclev10030212m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 14365602-14366601 Citrus clementina
Ciclev10030212m.g 2.0kb upstream 2.0kb upstream 2540 true scaffold_8: 14363062-14365601 Citrus clementina
Ciclev10030212m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 14363062-14365061 Citrus clementina
Ciclev10030212m.g 2.0kb downstream 2.0kb downstream 2540 true scaffold_8: 14365062-14367601 Citrus clementina
Ciclev10030212m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 14365602-14367601 Citrus clementina
Ciclev10030212m.g 5.0kb upstream 5.0kb upstream 5540 true scaffold_8: 14360062-14365601 Citrus clementina
Ciclev10030212m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 14360062-14365061 Citrus clementina
Ciclev10030212m.g 5.0kb downstream 5.0kb downstream 5540 true scaffold_8: 14365062-14370601 Citrus clementina
Ciclev10030212m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 14365602-14370601 Citrus clementina
Ciclev10030212m.g 10.0kb upstream 10.0kb upstream 10540 true scaffold_8: 14355062-14365601 Citrus clementina
Ciclev10030212m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 14355062-14365061 Citrus clementina
Ciclev10030212m.g 10.0kb downstream 10.0kb downstream 10540 true scaffold_8: 14365062-14375601 Citrus clementina
Ciclev10030212m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 14365602-14375601 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121527033 5273 Angiosperm Singleton cluster - no MSA
124326397 5266 SBM Singleton cluster - no MSA
124171774 5268 Malvidae Singleton cluster - no MSA
123894382 5270 Rosid Singleton cluster - no MSA
123476278 5271 Pentapetalae Singleton cluster - no MSA
122511532 5272 Eudicot Singleton cluster - no MSA
120799795 5274 Embryophyte Singleton cluster - no MSA
122841349 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain