Gene : Ciclev10029251m.g C. clementina v1.0
Defline:  (1 of 2) PTHR31238:SF39 - GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 1-RELATED Genomic Order:  1130
Name:  ? Ciclev10029251m.g Secondary Identifier:  ? PAC:20813153
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina DETOX1-PWY Citrus clementina pathologic  
Cclementina DETOX1-PWY-1 Citrus clementina pathologic  
Cclementina PWY-6854 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10029251m.g 0.5kb upstream 0.5kb upstream 2399 true scaffold_8: 16581038-16583436 Citrus clementina
Ciclev10029251m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 16582937-16583436 Citrus clementina
Ciclev10029251m.g 0.5kb downstream 0.5kb downstream 2399 true scaffold_8: 16580538-16582936 Citrus clementina
Ciclev10029251m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 16580538-16581037 Citrus clementina
Ciclev10029251m.g 1.0kb upstream 1.0kb upstream 2899 true scaffold_8: 16581038-16583936 Citrus clementina
Ciclev10029251m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 16582937-16583936 Citrus clementina
Ciclev10029251m.g 1.0kb downstream 1.0kb downstream 2899 true scaffold_8: 16580038-16582936 Citrus clementina
Ciclev10029251m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 16580038-16581037 Citrus clementina
Ciclev10029251m.g 2.0kb upstream 2.0kb upstream 3899 true scaffold_8: 16581038-16584936 Citrus clementina
Ciclev10029251m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 16582937-16584936 Citrus clementina
Ciclev10029251m.g 2.0kb downstream 2.0kb downstream 3899 true scaffold_8: 16579038-16582936 Citrus clementina
Ciclev10029251m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 16579038-16581037 Citrus clementina
Ciclev10029251m.g 5.0kb upstream 5.0kb upstream 6899 true scaffold_8: 16581038-16587936 Citrus clementina
Ciclev10029251m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 16582937-16587936 Citrus clementina
Ciclev10029251m.g 5.0kb downstream 5.0kb downstream 6899 true scaffold_8: 16576038-16582936 Citrus clementina
Ciclev10029251m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 16576038-16581037 Citrus clementina
Ciclev10029251m.g 10.0kb upstream 10.0kb upstream 11899 true scaffold_8: 16581038-16592936 Citrus clementina
Ciclev10029251m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 16582937-16592936 Citrus clementina
Ciclev10029251m.g 10.0kb downstream 10.0kb downstream 11899 true scaffold_8: 16571038-16582936 Citrus clementina
Ciclev10029251m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 16571038-16581037 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041466 5273 Angiosperm View MSA
124343643 5266 SBM View MSA
124244978 5268 Malvidae View MSA
124073822 5270 Rosid View MSA
123750442 5271 Pentapetalae View MSA
122795274 5272 Eudicot View MSA
121349986 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain