Gene : Ciclev10030419m.g C. clementina v1.0
Defline:  (1 of 1) PTHR12001:SF41 - HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC Genomic Order:  106
Name:  ? Ciclev10030419m.g Secondary Identifier:  ? PAC:20814568
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-5120 Citrus clementina pathologic  
Cclementina PWY-5122 Citrus clementina pathologic  
Cclementina PWY-5123 Citrus clementina pathologic  
Cclementina PWY-5910 Citrus clementina pathologic  
Cclementina PWY-7709 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10030419m.g 0.5kb upstream 0.5kb upstream 2703 true scaffold_8: 667698-670400 Citrus clementina
Ciclev10030419m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 667698-668197 Citrus clementina
Ciclev10030419m.g 0.5kb downstream 0.5kb downstream 2703 true scaffold_8: 668198-670900 Citrus clementina
Ciclev10030419m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 670401-670900 Citrus clementina
Ciclev10030419m.g 1.0kb upstream 1.0kb upstream 3203 true scaffold_8: 667198-670400 Citrus clementina
Ciclev10030419m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 667198-668197 Citrus clementina
Ciclev10030419m.g 1.0kb downstream 1.0kb downstream 3203 true scaffold_8: 668198-671400 Citrus clementina
Ciclev10030419m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 670401-671400 Citrus clementina
Ciclev10030419m.g 2.0kb upstream 2.0kb upstream 4203 true scaffold_8: 666198-670400 Citrus clementina
Ciclev10030419m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 666198-668197 Citrus clementina
Ciclev10030419m.g 2.0kb downstream 2.0kb downstream 4203 true scaffold_8: 668198-672400 Citrus clementina
Ciclev10030419m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 670401-672400 Citrus clementina
Ciclev10030419m.g 5.0kb upstream 5.0kb upstream 7203 true scaffold_8: 663198-670400 Citrus clementina
Ciclev10030419m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 663198-668197 Citrus clementina
Ciclev10030419m.g 5.0kb downstream 5.0kb downstream 7203 true scaffold_8: 668198-675400 Citrus clementina
Ciclev10030419m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 670401-675400 Citrus clementina
Ciclev10030419m.g 10.0kb upstream 10.0kb upstream 12203 true scaffold_8: 658198-670400 Citrus clementina
Ciclev10030419m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 658198-668197 Citrus clementina
Ciclev10030419m.g 10.0kb downstream 10.0kb downstream 12203 true scaffold_8: 668198-680400 Citrus clementina
Ciclev10030419m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 670401-680400 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341620 5266 SBM View MSA
124238583 5268 Malvidae View MSA
124050179 5270 Rosid View MSA
123740099 5271 Pentapetalae View MSA
122794742 5272 Eudicot View MSA
122045849 5273 Angiosperm View MSA
121310516 5274 Embryophyte View MSA
123347979 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain