Gene : Ciclev10018820m.g C. clementina v1.0
Defline:  (1 of 1) PTHR11476:SF7 - HISTIDYL-TRNA SYNTHETASE, ISOFORM D Genomic Order:  1756
Name:  ? Ciclev10018820m.g Secondary Identifier:  ? PAC:20807070
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina TRNA-CHARGING-PWY Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10018820m.g 0.5kb upstream 0.5kb upstream 8174 true scaffold_3: 21491282-21499455 Citrus clementina
Ciclev10018820m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 21491282-21491781 Citrus clementina
Ciclev10018820m.g 0.5kb downstream 0.5kb downstream 8174 true scaffold_3: 21491782-21499955 Citrus clementina
Ciclev10018820m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 21499456-21499955 Citrus clementina
Ciclev10018820m.g 1.0kb upstream 1.0kb upstream 8674 true scaffold_3: 21490782-21499455 Citrus clementina
Ciclev10018820m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 21490782-21491781 Citrus clementina
Ciclev10018820m.g 1.0kb downstream 1.0kb downstream 8674 true scaffold_3: 21491782-21500455 Citrus clementina
Ciclev10018820m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 21499456-21500455 Citrus clementina
Ciclev10018820m.g 2.0kb upstream 2.0kb upstream 9674 true scaffold_3: 21489782-21499455 Citrus clementina
Ciclev10018820m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 21489782-21491781 Citrus clementina
Ciclev10018820m.g 2.0kb downstream 2.0kb downstream 9674 true scaffold_3: 21491782-21501455 Citrus clementina
Ciclev10018820m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 21499456-21501455 Citrus clementina
Ciclev10018820m.g 5.0kb upstream 5.0kb upstream 12674 true scaffold_3: 21486782-21499455 Citrus clementina
Ciclev10018820m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 21486782-21491781 Citrus clementina
Ciclev10018820m.g 5.0kb downstream 5.0kb downstream 12674 true scaffold_3: 21491782-21504455 Citrus clementina
Ciclev10018820m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 21499456-21504455 Citrus clementina
Ciclev10018820m.g 10.0kb upstream 10.0kb upstream 17674 true scaffold_3: 21481782-21499455 Citrus clementina
Ciclev10018820m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 21481782-21491781 Citrus clementina
Ciclev10018820m.g 10.0kb downstream 10.0kb downstream 17674 true scaffold_3: 21491782-21509455 Citrus clementina
Ciclev10018820m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 21499456-21509455 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337694 5266 SBM View MSA
124242303 5268 Malvidae View MSA
124074510 5270 Rosid View MSA
123750553 5271 Pentapetalae View MSA
122793881 5272 Eudicot View MSA
122047537 5273 Angiosperm View MSA
121349127 5274 Embryophyte View MSA
123427860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain