Gene : Ciclev10018789m.g C. clementina v1.0
Defline:  (1 of 1) PTHR23163:SF3 - E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 Genomic Order:  4385
Name:  ? Ciclev10018789m.g Secondary Identifier:  ? PAC:20809693
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-7511 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10018789m.g 0.5kb upstream 0.5kb upstream 10518 true scaffold_3: 50317007-50327524 Citrus clementina
Ciclev10018789m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 50317007-50317506 Citrus clementina
Ciclev10018789m.g 0.5kb downstream 0.5kb downstream 10518 true scaffold_3: 50317507-50328024 Citrus clementina
Ciclev10018789m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 50327525-50328024 Citrus clementina
Ciclev10018789m.g 1.0kb upstream 1.0kb upstream 11018 true scaffold_3: 50316507-50327524 Citrus clementina
Ciclev10018789m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 50316507-50317506 Citrus clementina
Ciclev10018789m.g 1.0kb downstream 1.0kb downstream 11018 true scaffold_3: 50317507-50328524 Citrus clementina
Ciclev10018789m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 50327525-50328524 Citrus clementina
Ciclev10018789m.g 2.0kb upstream 2.0kb upstream 12018 true scaffold_3: 50315507-50327524 Citrus clementina
Ciclev10018789m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 50315507-50317506 Citrus clementina
Ciclev10018789m.g 2.0kb downstream 2.0kb downstream 12018 true scaffold_3: 50317507-50329524 Citrus clementina
Ciclev10018789m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 50327525-50329524 Citrus clementina
Ciclev10018789m.g 5.0kb upstream 5.0kb upstream 15018 true scaffold_3: 50312507-50327524 Citrus clementina
Ciclev10018789m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 50312507-50317506 Citrus clementina
Ciclev10018789m.g 5.0kb downstream 5.0kb downstream 15018 true scaffold_3: 50317507-50332524 Citrus clementina
Ciclev10018789m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 50327525-50332524 Citrus clementina
Ciclev10018789m.g 10.0kb upstream 10.0kb upstream 20018 true scaffold_3: 50307507-50327524 Citrus clementina
Ciclev10018789m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 50307507-50317506 Citrus clementina
Ciclev10018789m.g 10.0kb downstream 10.0kb downstream 20018 true scaffold_3: 50317507-50337524 Citrus clementina
Ciclev10018789m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 50327525-50337524 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344060 5266 SBM View MSA
124251962 5268 Malvidae View MSA
124061906 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain