Gene : Ciclev10019866m.g C. clementina v1.0
Defline:  (1 of 1) KOG0231 - Junctional membrane complex protein Junctophilin and related MORN repeat proteins Genomic Order:  4439
Name:  ? Ciclev10019866m.g Secondary Identifier:  ? PAC:20806817
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-6351 Citrus clementina pathologic  
Cclementina PWY-6352 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10019866m.g 0.5kb upstream 0.5kb upstream 3616 true scaffold_3: 50740989-50744604 Citrus clementina
Ciclev10019866m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 50740989-50741488 Citrus clementina
Ciclev10019866m.g 0.5kb downstream 0.5kb downstream 3616 true scaffold_3: 50741489-50745104 Citrus clementina
Ciclev10019866m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 50744605-50745104 Citrus clementina
Ciclev10019866m.g 1.0kb upstream 1.0kb upstream 4116 true scaffold_3: 50740489-50744604 Citrus clementina
Ciclev10019866m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 50740489-50741488 Citrus clementina
Ciclev10019866m.g 1.0kb downstream 1.0kb downstream 4116 true scaffold_3: 50741489-50745604 Citrus clementina
Ciclev10019866m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 50744605-50745604 Citrus clementina
Ciclev10019866m.g 2.0kb upstream 2.0kb upstream 5116 true scaffold_3: 50739489-50744604 Citrus clementina
Ciclev10019866m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 50739489-50741488 Citrus clementina
Ciclev10019866m.g 2.0kb downstream 2.0kb downstream 5116 true scaffold_3: 50741489-50746604 Citrus clementina
Ciclev10019866m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 50744605-50746604 Citrus clementina
Ciclev10019866m.g 5.0kb upstream 5.0kb upstream 8116 true scaffold_3: 50736489-50744604 Citrus clementina
Ciclev10019866m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 50736489-50741488 Citrus clementina
Ciclev10019866m.g 5.0kb downstream 5.0kb downstream 8116 true scaffold_3: 50741489-50749604 Citrus clementina
Ciclev10019866m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 50744605-50749604 Citrus clementina
Ciclev10019866m.g 10.0kb upstream 10.0kb upstream 13116 true scaffold_3: 50731489-50744604 Citrus clementina
Ciclev10019866m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 50731489-50741488 Citrus clementina
Ciclev10019866m.g 10.0kb downstream 10.0kb downstream 13116 true scaffold_3: 50741489-50754604 Citrus clementina
Ciclev10019866m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 50744605-50754604 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340371 5266 SBM View MSA
124254332 5268 Malvidae View MSA
124068935 5270 Rosid View MSA
123741886 5271 Pentapetalae View MSA
122788830 5272 Eudicot View MSA
122047970 5273 Angiosperm View MSA
121346800 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain