Gene : Ciclev10019734m.g C. clementina v1.0
Defline:  (1 of 1) 2.5.1.19 - 3-phosphoshikimate 1-carboxyvinyltransferase / EPSP synthase Genomic Order:  4325
Name:  ? Ciclev10019734m.g Secondary Identifier:  ? PAC:20810731
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina ARO-PWY Citrus clementina pathologic  
Cclementina PWY-6163 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10019734m.g 0.5kb upstream 0.5kb upstream 4325 true scaffold_3: 49821906-49826230 Citrus clementina
Ciclev10019734m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 49825731-49826230 Citrus clementina
Ciclev10019734m.g 0.5kb downstream 0.5kb downstream 4325 true scaffold_3: 49821406-49825730 Citrus clementina
Ciclev10019734m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 49821406-49821905 Citrus clementina
Ciclev10019734m.g 1.0kb upstream 1.0kb upstream 4825 true scaffold_3: 49821906-49826730 Citrus clementina
Ciclev10019734m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 49825731-49826730 Citrus clementina
Ciclev10019734m.g 1.0kb downstream 1.0kb downstream 4825 true scaffold_3: 49820906-49825730 Citrus clementina
Ciclev10019734m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 49820906-49821905 Citrus clementina
Ciclev10019734m.g 2.0kb upstream 2.0kb upstream 5825 true scaffold_3: 49821906-49827730 Citrus clementina
Ciclev10019734m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 49825731-49827730 Citrus clementina
Ciclev10019734m.g 2.0kb downstream 2.0kb downstream 5825 true scaffold_3: 49819906-49825730 Citrus clementina
Ciclev10019734m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 49819906-49821905 Citrus clementina
Ciclev10019734m.g 5.0kb upstream 5.0kb upstream 8825 true scaffold_3: 49821906-49830730 Citrus clementina
Ciclev10019734m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 49825731-49830730 Citrus clementina
Ciclev10019734m.g 5.0kb downstream 5.0kb downstream 8825 true scaffold_3: 49816906-49825730 Citrus clementina
Ciclev10019734m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 49816906-49821905 Citrus clementina
Ciclev10019734m.g 10.0kb upstream 10.0kb upstream 13825 true scaffold_3: 49821906-49835730 Citrus clementina
Ciclev10019734m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 49825731-49835730 Citrus clementina
Ciclev10019734m.g 10.0kb downstream 10.0kb downstream 13825 true scaffold_3: 49811906-49825730 Citrus clementina
Ciclev10019734m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 49811906-49821905 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341976 5266 SBM View MSA
124237707 5268 Malvidae View MSA
124067523 5270 Rosid View MSA
123738347 5271 Pentapetalae View MSA
122792138 5272 Eudicot View MSA
122041964 5273 Angiosperm View MSA
121345789 5274 Embryophyte View MSA
123424749 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain