Gene : Ciclev10019532m.g C. clementina v1.0
Defline:  (1 of 1) PTHR24096:SF169 - 4-COUMARATE--COA LIGASE 3 Genomic Order:  2953
Name:  ? Ciclev10019532m.g Secondary Identifier:  ? PAC:20807526
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-1121 Citrus clementina pathologic  
Cclementina PWY1F-FLAVSYN Citrus clementina pathologic  
Cclementina PWY-361 Citrus clementina pathologic  
Cclementina PWY-6435 Citrus clementina pathologic  
Cclementina PWY-6673 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10019532m.g 0.5kb upstream 0.5kb upstream 6214 true scaffold_3: 39867262-39873475 Citrus clementina
Ciclev10019532m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 39867262-39867761 Citrus clementina
Ciclev10019532m.g 0.5kb downstream 0.5kb downstream 6214 true scaffold_3: 39867762-39873975 Citrus clementina
Ciclev10019532m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 39873476-39873975 Citrus clementina
Ciclev10019532m.g 1.0kb upstream 1.0kb upstream 6714 true scaffold_3: 39866762-39873475 Citrus clementina
Ciclev10019532m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 39866762-39867761 Citrus clementina
Ciclev10019532m.g 1.0kb downstream 1.0kb downstream 6714 true scaffold_3: 39867762-39874475 Citrus clementina
Ciclev10019532m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 39873476-39874475 Citrus clementina
Ciclev10019532m.g 2.0kb upstream 2.0kb upstream 7714 true scaffold_3: 39865762-39873475 Citrus clementina
Ciclev10019532m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 39865762-39867761 Citrus clementina
Ciclev10019532m.g 2.0kb downstream 2.0kb downstream 7714 true scaffold_3: 39867762-39875475 Citrus clementina
Ciclev10019532m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 39873476-39875475 Citrus clementina
Ciclev10019532m.g 5.0kb upstream 5.0kb upstream 10714 true scaffold_3: 39862762-39873475 Citrus clementina
Ciclev10019532m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 39862762-39867761 Citrus clementina
Ciclev10019532m.g 5.0kb downstream 5.0kb downstream 10714 true scaffold_3: 39867762-39878475 Citrus clementina
Ciclev10019532m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 39873476-39878475 Citrus clementina
Ciclev10019532m.g 10.0kb upstream 10.0kb upstream 15714 true scaffold_3: 39857762-39873475 Citrus clementina
Ciclev10019532m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 39857762-39867761 Citrus clementina
Ciclev10019532m.g 10.0kb downstream 10.0kb downstream 15714 true scaffold_3: 39867762-39883475 Citrus clementina
Ciclev10019532m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 39873476-39883475 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337093 5266 SBM View MSA
124239638 5268 Malvidae View MSA
124063529 5270 Rosid View MSA
123738118 5271 Pentapetalae View MSA
122792374 5272 Eudicot View MSA
122048251 5273 Angiosperm View MSA
121345883 5274 Embryophyte View MSA
123380283 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain