Gene : Ciclev10020042m.g C. clementina v1.0
Defline:  (1 of 2) 2.3.3.10 - Hydroxymethylglutaryl-CoA synthase / Hydroxymethylglutaryl coenzyme alpha-condensing enzyme Genomic Order:  910
Name:  ? Ciclev10020042m.g Secondary Identifier:  ? PAC:20808450
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-5910 Citrus clementina pathologic  
Cclementina PWY-922 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10020042m.g 0.5kb upstream 0.5kb upstream 5638 true scaffold_3: 6711279-6716916 Citrus clementina
Ciclev10020042m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6716417-6716916 Citrus clementina
Ciclev10020042m.g 0.5kb downstream 0.5kb downstream 5638 true scaffold_3: 6710779-6716416 Citrus clementina
Ciclev10020042m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6710779-6711278 Citrus clementina
Ciclev10020042m.g 1.0kb upstream 1.0kb upstream 6138 true scaffold_3: 6711279-6717416 Citrus clementina
Ciclev10020042m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6716417-6717416 Citrus clementina
Ciclev10020042m.g 1.0kb downstream 1.0kb downstream 6138 true scaffold_3: 6710279-6716416 Citrus clementina
Ciclev10020042m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6710279-6711278 Citrus clementina
Ciclev10020042m.g 2.0kb upstream 2.0kb upstream 7138 true scaffold_3: 6711279-6718416 Citrus clementina
Ciclev10020042m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6716417-6718416 Citrus clementina
Ciclev10020042m.g 2.0kb downstream 2.0kb downstream 7138 true scaffold_3: 6709279-6716416 Citrus clementina
Ciclev10020042m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6709279-6711278 Citrus clementina
Ciclev10020042m.g 5.0kb upstream 5.0kb upstream 10138 true scaffold_3: 6711279-6721416 Citrus clementina
Ciclev10020042m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6716417-6721416 Citrus clementina
Ciclev10020042m.g 5.0kb downstream 5.0kb downstream 10138 true scaffold_3: 6706279-6716416 Citrus clementina
Ciclev10020042m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6706279-6711278 Citrus clementina
Ciclev10020042m.g 10.0kb upstream 10.0kb upstream 15138 true scaffold_3: 6711279-6726416 Citrus clementina
Ciclev10020042m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6716417-6726416 Citrus clementina
Ciclev10020042m.g 10.0kb downstream 10.0kb downstream 15138 true scaffold_3: 6701279-6716416 Citrus clementina
Ciclev10020042m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6701279-6711278 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341389 5266 SBM View MSA
124241910 5268 Malvidae View MSA
124060634 5270 Rosid View MSA
123746885 5271 Pentapetalae View MSA
122791824 5272 Eudicot View MSA
122042701 5273 Angiosperm View MSA
121346246 5274 Embryophyte View MSA
123424795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain