Gene : Ciclev10021015m.g C. clementina v1.0
Defline:  (1 of 8) KOG1100 - Predicted E3 ubiquitin ligase Genomic Order:  1304
Name:  ? Ciclev10021015m.g Secondary Identifier:  ? PAC:20810530
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-7511 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10021015m.g 0.5kb upstream 0.5kb upstream 2061 true scaffold_3: 11012407-11014467 Citrus clementina
Ciclev10021015m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 11013968-11014467 Citrus clementina
Ciclev10021015m.g 0.5kb downstream 0.5kb downstream 2061 true scaffold_3: 11011907-11013967 Citrus clementina
Ciclev10021015m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 11011907-11012406 Citrus clementina
Ciclev10021015m.g 1.0kb upstream 1.0kb upstream 2561 true scaffold_3: 11012407-11014967 Citrus clementina
Ciclev10021015m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 11013968-11014967 Citrus clementina
Ciclev10021015m.g 1.0kb downstream 1.0kb downstream 2561 true scaffold_3: 11011407-11013967 Citrus clementina
Ciclev10021015m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 11011407-11012406 Citrus clementina
Ciclev10021015m.g 2.0kb upstream 2.0kb upstream 3561 true scaffold_3: 11012407-11015967 Citrus clementina
Ciclev10021015m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 11013968-11015967 Citrus clementina
Ciclev10021015m.g 2.0kb downstream 2.0kb downstream 3561 true scaffold_3: 11010407-11013967 Citrus clementina
Ciclev10021015m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 11010407-11012406 Citrus clementina
Ciclev10021015m.g 5.0kb upstream 5.0kb upstream 6561 true scaffold_3: 11012407-11018967 Citrus clementina
Ciclev10021015m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 11013968-11018967 Citrus clementina
Ciclev10021015m.g 5.0kb downstream 5.0kb downstream 6561 true scaffold_3: 11007407-11013967 Citrus clementina
Ciclev10021015m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 11007407-11012406 Citrus clementina
Ciclev10021015m.g 10.0kb upstream 10.0kb upstream 11561 true scaffold_3: 11012407-11023967 Citrus clementina
Ciclev10021015m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 11013968-11023967 Citrus clementina
Ciclev10021015m.g 10.0kb downstream 10.0kb downstream 11561 true scaffold_3: 11002407-11013967 Citrus clementina
Ciclev10021015m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 11002407-11012406 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345958 5266 SBM View MSA
124243866 5268 Malvidae View MSA
124065052 5270 Rosid View MSA
123752259 5271 Pentapetalae View MSA
122794971 5272 Eudicot View MSA
122050089 5273 Angiosperm View MSA
121348016 5274 Embryophyte View MSA
123380706 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain